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    Morc2b microrchidia 2B [ Rattus norvegicus (Norway rat) ]

    Gene ID: 299555, updated on 3-Feb-2019

    Summary

    Official Symbol
    Morc2bprovided by RGD
    Official Full Name
    microrchidia 2Bprovided by RGD
    Primary source
    RGD:1564020
    See related
    Ensembl:ENSRNOG00000004501
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1564020
    Expression
    Restricted expression toward (RPKM 109.8) See more

    Genomic context

    See Morc2b in Genome Data Viewer
    Location:
    7q11
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    106 current Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (15479754..15483834, complement)
    104 previous assembly Rnor_5.0 (GCF_000001895.4) 7 NC_005106.3 (15650756..15654836, complement)

    Chromosome 7 - NC_005106.4Genomic Context describing neighboring genes Neighboring gene RGD1560314 Neighboring gene similar to KIAA1111-like protein Neighboring gene similar to Ferritin light chain (Ferritin L subunit) Neighboring gene zinc finger protein 563 Neighboring gene olfactory receptor 1090 Neighboring gene similar to DNA methyltransferase 1-associated protein 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General gene information

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    double-strand break repair involved in meiotic recombination IEA
    Inferred from Electronic Annotation
    more info
     
    gamete generation IEA
    Inferred from Electronic Annotation
    more info
     
    synapsis IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    MORC family CW-type zinc finger protein 2B

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001106764.1NP_001100234.1  MORC family CW-type zinc finger protein 2B

      See identical proteins and their annotated locations for NP_001100234.1

      Status: PROVISIONAL

      Source sequence(s)
      CH474029
      UniProtKB/TrEMBL
      D4A8J3
      Related
      ENSRNOP00000054417.2, ENSRNOT00000057608.4
      Conserved Domains (3) summary
      pfam07496
      Location:495541
      zf-CW; CW-type Zinc Finger
      pfam13589
      Location:29169
      HATPase_c_3; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
      cl02565
      Location:444576
      RGS; Regulator of G protein signaling (RGS) domain superfamily

    RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Rnor_6.0 Primary Assembly

    Genomic

    1. NC_005106.4 Reference Rnor_6.0 Primary Assembly

      Range
      15479754..15483834 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate Rn_Celera

    Genomic

    1. AC_000075.1 Alternate Rn_Celera

      Range
      10407720..10411800 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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