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    Adgrg3 adhesion G protein-coupled receptor G3 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 291854, updated on 2-Oct-2018

    Summary

    Official Symbol
    Adgrg3provided by RGD
    Official Full Name
    adhesion G protein-coupled receptor G3provided by RGD
    Primary source
    RGD:1305674
    See related
    Ensembl:ENSRNOG00000014896
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Gpr97
    Expression
    Biased expression in Kidney (RPKM 11.6), Spleen (RPKM 8.4) and 8 other tissues See more
    Orthologs

    Genomic context

    See Adgrg3 in Genome Data Viewer
    Location:
    19p13
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current Rnor_6.0 (GCF_000001895.5) 19 NC_005118.4 (10392001..10422606, complement)
    104 previous assembly Rnor_5.0 (GCF_000001895.4) 19 NC_005118.3 (10371082..10402917, complement)

    Chromosome 19 - NC_005118.4Genomic Context describing neighboring genes Neighboring gene katanin regulatory subunit B1 Neighboring gene dynein regulatory complex subunit 7 Neighboring gene adhesion G protein-coupled receptor G1 Neighboring gene adhesion G protein-coupled receptor G5

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Pathways from BioSystems

    General gene information

    Homology

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    G protein-coupled receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Process Evidence Code Pubs
    B cell differentiation IEA
    Inferred from Electronic Annotation
    more info
     
    B cell differentiation ISO
    Inferred from Sequence Orthology
    more info
     
    G protein-coupled receptor signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    adenylate cyclase-activating G protein-coupled receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    cell surface receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    negative regulation of CREB transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
     
    negative regulation of CREB transcription factor activity ISO
    Inferred from Sequence Orthology
    more info
     
    negative regulation of NIK/NF-kappaB signaling IEA
    Inferred from Electronic Annotation
    more info
     
    negative regulation of NIK/NF-kappaB signaling ISO
    Inferred from Sequence Orthology
    more info
     
    regulation of cell migration IEA
    Inferred from Electronic Annotation
    more info
     
    regulation of cell migration ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    integral component of plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    intracellular IEA
    Inferred from Electronic Annotation
    more info
     
    plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    probable G-protein coupled receptor 97; adhesion G protein-coupled receptor G3
    Names
    G protein-coupled receptor 97

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Rnor_6.0 Primary Assembly

    Genomic

    1. NC_005118.4 Reference Rnor_6.0 Primary Assembly

      Range
      10392001..10422606 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006255127.3XP_006255189.1  adhesion G protein-coupled receptor G3 isoform X2

      See identical proteins and their annotated locations for XP_006255189.1

      Conserved Domains (2) summary
      pfam01825
      Location:167206
      GPS; GPCR proteolysis site, GPS, motif
      cl21561
      Location:216465
      7tm_4; Olfactory receptor
    2. XM_006255126.3XP_006255188.1  adhesion G protein-coupled receptor G3 isoform X1

      See identical proteins and their annotated locations for XP_006255188.1

      UniProtKB/TrEMBL
      A0A0G2JSN6
      Related
      ENSRNOP00000020062.5, ENSRNOT00000020062.7
      Conserved Domains (2) summary
      pfam01825
      Location:216255
      GPS; GPCR proteolysis site, GPS, motif
      cl21561
      Location:265514
      7tm_4; Olfactory receptor

    Alternate Rn_Celera

    Genomic

    1. AC_000087.1 Alternate Rn_Celera

      Range
      9860063..9890543 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006222661.3XP_006222723.1  adhesion G protein-coupled receptor G3 isoform X2

      See identical proteins and their annotated locations for XP_006222723.1

      Conserved Domains (2) summary
      pfam01825
      Location:167206
      GPS; GPCR proteolysis site, GPS, motif
      cl21561
      Location:216465
      7tm_4; Olfactory receptor
    2. XM_006222660.3XP_006222722.1  adhesion G protein-coupled receptor G3 isoform X1

      See identical proteins and their annotated locations for XP_006222722.1

      UniProtKB/TrEMBL
      A0A0G2JSN6
      Conserved Domains (2) summary
      pfam01825
      Location:216255
      GPS; GPCR proteolysis site, GPS, motif
      cl21561
      Location:265514
      7tm_4; Olfactory receptor
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