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    GPR42 G protein-coupled receptor 42 (gene/pseudogene) [ Homo sapiens (human) ]

    Gene ID: 2866, updated on 17-Jun-2019

    Summary

    Official Symbol
    GPR42provided by HGNC
    Official Full Name
    G protein-coupled receptor 42 (gene/pseudogene)provided by HGNC
    Primary source
    HGNC:HGNC:4500
    See related
    Ensembl:ENSG00000126251 MIM:603822
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    FFAR1L; FFAR3L; GPR41L; GPR42P

    Genomic context

    See GPR42 in Genome Data Viewer
    Location:
    19q13.12
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    109.20190607 current GRCh38.p13 (GCF_000001405.39) 19 NC_000019.10 (35371095..35372453)
    105 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (35862262..35863302)

    Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene free fatty acid receptor 1 Neighboring gene free fatty acid receptor 3 Neighboring gene eukaryotic translation elongation factor 1 alpha 1 pseudogene 7 Neighboring gene long intergenic non-protein coding RNA 1531 Neighboring gene RNA, 7SL, cytoplasmic 491, pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    Pathways from BioSystems

    • GPCRs, Class A Rhodopsin-like, organism-specific biosystem (from WikiPathways)
      GPCRs, Class A Rhodopsin-like, organism-specific biosystemThis pathway was created using the GPCRDB (Horn et al., 1998), http://www.gpcr.org/7tm/ (originally at http://www.cmbi.kun.nl/7tm/). The groupings are based on the GPCR phylogenetic tree available fr...

    General protein information

    Preferred Names
    G-protein coupled receptor 42
    Names
    G protein-coupled receptor 42 pseudogene
    G-protein coupled receptor

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001348195.1NP_001335124.1  G-protein coupled receptor 42

      Status: VALIDATED

      Source sequence(s)
      AC002511
      UniProtKB/Swiss-Prot
      O15529
      UniProtKB/TrEMBL
      A0A0K0PUY3
      Related
      ENSP00000410925.1, ENST00000454971.2
      Conserved Domains (1) summary
      cd15170
      Location:15289
      7tmA_FFAR2_FFAR3; free fatty acid receptors 2, 3, and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p13 Primary Assembly

    Genomic

    1. NC_000019.10 Reference GRCh38.p13 Primary Assembly

      Range
      35371095..35372453
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NG_008348.3: Suppressed sequence

      Description
      NG_008348.3: This RefSeq was removed because it is now thought that this gene does encode a protein.
    2. NM_005305.1: Suppressed sequence

      Description
      NM_005305.1: This RefSeq was permanently suppressed because it is now thought that this gene is a pseudogene.
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