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    ANKRD34A ankyrin repeat domain 34A [ Homo sapiens (human) ]

    Gene ID: 284615, updated on 15-Apr-2019

    Summary

    Official Symbol
    ANKRD34Aprovided by HGNC
    Official Full Name
    ankyrin repeat domain 34Aprovided by HGNC
    Primary source
    HGNC:HGNC:27639
    See related
    Ensembl:ENSG00000272031
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    ANKRD34
    Expression
    Biased expression in brain (RPKM 4.5), prostate (RPKM 0.7) and 13 other tissues See more
    Orthologs

    Genomic context

    See ANKRD34A in Genome Data Viewer
    Location:
    1q21.1
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    109 current GRCh38.p12 (GCF_000001405.38) 1 NC_000001.11 (145959441..145964582, complement)
    105 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (145470508..145475647)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene gonadotropin releasing hormone receptor 2 (pseudogene) Neighboring gene RNA binding motif protein 8A Neighboring gene LIX1L antisense RNA 1 Neighboring gene limb and CNS expressed 1 like Neighboring gene conserved acetylation island sequence C12 enhancer Neighboring gene RNA polymerase III subunit G like Neighboring gene POLR3GL-TXNIP intergenic CAGE-defined low expression enhancer Neighboring gene thioredoxin interacting protein

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • DKFZp761F202

    General protein information

    Preferred Names
    ankyrin repeat domain-containing protein 34A
    Names
    ankyrin repeat domain 34

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001039888.4NP_001034977.1  ankyrin repeat domain-containing protein 34A

      See identical proteins and their annotated locations for NP_001034977.1

      Status: VALIDATED

      Source sequence(s)
      AC243547, AK128050, BM723295, DA081864
      Consensus CDS
      CCDS72874.1
      UniProtKB/Swiss-Prot
      Q69YU3
      Related
      ENSP00000475189.1, ENST00000606888.3
      Conserved Domains (4) summary
      cd00204
      Location:8131
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:9108
      Ank_2; Ankyrin repeats (3 copies)
      pfam13637
      Location:96131
      Ank_4; Ankyrin repeats (many copies)
      sd00045
      Location:835
      ANK; ANK repeat [structural motif]

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p12 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p12 Primary Assembly

      Range
      145959441..145964582 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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