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    PGM2L1 phosphoglucomutase 2 like 1 [ Homo sapiens (human) ]

    Gene ID: 283209, updated on 17-Jun-2019

    Summary

    Official Symbol
    PGM2L1provided by HGNC
    Official Full Name
    phosphoglucomutase 2 like 1provided by HGNC
    Primary source
    HGNC:HGNC:20898
    See related
    Ensembl:ENSG00000165434 MIM:611610
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    BM32A; PMMLP
    Expression
    Biased expression in brain (RPKM 28.2), endometrium (RPKM 3.0) and 7 other tissues See more
    Orthologs

    Genomic context

    See PGM2L1 in Genome Data Viewer
    Location:
    11q13.4
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    109.20190607 current GRCh38.p13 (GCF_000001405.39) 11 NC_000011.10 (74330316..74398751, complement)
    105 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (74041361..74109502, complement)

    Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene protein phosphatase methylesterase 1 Neighboring gene uncharacterized LOC105369383 Neighboring gene prolyl 4-hydroxylase subunit alpha 3 Neighboring gene P4HA3 antisense RNA 1 Neighboring gene uncharacterized LOC112268078 Neighboring gene heterogeneous nuclear ribonucleoprotein A1 pseudogene 40 Neighboring gene microRNA 548al Neighboring gene potassium voltage-gated channel subfamily E regulatory subunit 3

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • FLJ32029, FLJ33458, MGC71501

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    glucose-1,6-bisphosphate synthase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    glucose-1,6-bisphosphate synthase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    intramolecular transferase activity, phosphotransferases IEA
    Inferred from Electronic Annotation
    more info
     
    metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    canonical glycolysis TAS
    Traceable Author Statement
    more info
     
    galactose catabolic process TAS
    Traceable Author Statement
    more info
     
    glycogen biosynthetic process TAS
    Traceable Author Statement
    more info
     
    glycogen catabolic process TAS
    Traceable Author Statement
    more info
     
    Component Evidence Code Pubs
    cytosol TAS
    Traceable Author Statement
    more info
     

    General protein information

    Preferred Names
    glucose 1,6-bisphosphate synthase
    NP_775853.2
    XP_011543255.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_173582.5NP_775853.2  glucose 1,6-bisphosphate synthase

      See identical proteins and their annotated locations for NP_775853.2

      Status: VALIDATED

      Source sequence(s)
      AA775810, AB019210, AK090777, AL119265, AL134388, AP001085, BG430351, DA308228, DA392782, DB170848, DN991760
      Consensus CDS
      CCDS8231.1
      UniProtKB/Swiss-Prot
      Q6PCE3
      Related
      ENSP00000298198.4, ENST00000298198.5
      Conserved Domains (2) summary
      cd05799
      Location:64607
      PGM2; This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1). The mammalian PGM2 is thought to be a phosphopentomutase that catalyzes the conversion of the nucleoside breakdown products, ribose-1-phosphate and ...
      PTZ00150
      Location:24621
      PTZ00150; phosphoglucomutase-2-like protein; Provisional

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p13 Primary Assembly

    Genomic

    1. NC_000011.10 Reference GRCh38.p13 Primary Assembly

      Range
      74330316..74398751 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011544953.3XP_011543255.1  glucose 1,6-bisphosphate synthase isoform X1

      Conserved Domains (2) summary
      cd05799
      Location:85628
      PGM2; This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1). The mammalian PGM2 is thought to be a phosphopentomutase that catalyzes the conversion of the nucleoside breakdown products, ribose-1-phosphate and ...
      PTZ00150
      Location:24642
      PTZ00150; phosphoglucomutase-2-like protein; Provisional
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