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    GPR160 G protein-coupled receptor 160 [ Homo sapiens (human) ]

    Gene ID: 26996, updated on 17-Jun-2019

    Summary

    Official Symbol
    GPR160provided by HGNC
    Official Full Name
    G protein-coupled receptor 160provided by HGNC
    Primary source
    HGNC:HGNC:23693
    See related
    Ensembl:ENSG00000173890
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    GPCR1; GPCR150
    Expression
    Broad expression in small intestine (RPKM 20.7), duodenum (RPKM 16.2) and 15 other tissues See more
    Orthologs

    Genomic context

    See GPR160 in Genome Data Viewer
    Location:
    3q26.2
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    109.20190607 current GRCh38.p13 (GCF_000001405.39) 3 NC_000003.12 (170037995..170085417)
    105 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (169755735..169803184)

    Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene FAM20B, glycosaminoglycan xylosylkinase pseudogene Neighboring gene sterile alpha motif domain containing 7 Neighboring gene four and a half LIM domains 1 pseudogene Neighboring gene SEC62 homolog, preprotein translocation factor Neighboring gene lysine methyltransferase 5A pseudogene Neighboring gene RNA, U4 small nuclear 38, pseudogene Neighboring gene uncharacterized LOC105374209 Neighboring gene polyhomeotic homolog 3 Neighboring gene RNA, U6 small nuclear 315, pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General gene information

    Markers

    Homology

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    plasma membrane IDA
    Inferred from Direct Assay
    more info
     
    receptor complex IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    probable G-protein coupled receptor 160
    Names
    G-protein coupled receptor GPCR1
    hGPCR1
    putative G protein-coupled receptor

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_014373.3NP_055188.1  probable G-protein coupled receptor 160

      See identical proteins and their annotated locations for NP_055188.1

      Status: VALIDATED

      Source sequence(s)
      AI560646, BC000181, BX400356, BX414005
      Consensus CDS
      CCDS3211.1
      UniProtKB/Swiss-Prot
      Q9UJ42
      Related
      ENSP00000348161.5, ENST00000355897.10

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p13 Primary Assembly

    Genomic

    1. NC_000003.12 Reference GRCh38.p13 Primary Assembly

      Range
      170037995..170085417
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024453449.1XP_024309217.1  probable G-protein coupled receptor 160 isoform X1

    2. XM_005247346.4XP_005247403.1  probable G-protein coupled receptor 160 isoform X1

      See identical proteins and their annotated locations for XP_005247403.1

      UniProtKB/Swiss-Prot
      Q9UJ42
    3. XM_017006161.2XP_016861650.1  probable G-protein coupled receptor 160 isoform X1

      UniProtKB/Swiss-Prot
      Q9UJ42
    4. XM_024453450.1XP_024309218.1  probable G-protein coupled receptor 160 isoform X1

    5. XM_024453451.1XP_024309219.1  probable G-protein coupled receptor 160 isoform X1

    6. XM_005247347.4XP_005247404.1  probable G-protein coupled receptor 160 isoform X1

      See identical proteins and their annotated locations for XP_005247404.1

      UniProtKB/Swiss-Prot
      Q9UJ42
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