Format

Send to:

Choose Destination
    • Showing Current items.

    LINC01565 long intergenic non-protein coding RNA 1565 [ Homo sapiens (human) ]

    Gene ID: 23434, updated on 17-Jun-2019

    Summary

    Official Symbol
    LINC01565provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 1565provided by HGNC
    Primary source
    HGNC:HGNC:17099
    See related
    Ensembl:ENSG00000198685 MIM:618259
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    GR6; C3orf27
    Expression
    Low expression observed in reference dataset See more
    Orthologs

    Genomic context

    See LINC01565 in Genome Data Viewer
    Location:
    3q21.3
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    109.20190607 current GRCh38.p13 (GCF_000001405.39) 3 NC_000003.12 (128572000..128576086, complement)
    105 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (128290843..128294929, complement)

    Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC90246 Neighboring gene transmembrane p24 trafficking protein 10 pseudogene 2 Neighboring gene Sharpr-MPRA regulatory region 3129 Neighboring gene ribophorin I

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General gene information

    Markers

    Homology

    Other Names

    • putative GR6 protein

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_125802.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC080005, AF008192
      Related
      ENST00000356020.2

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p13 Primary Assembly

    Genomic

    1. NC_000003.12 Reference GRCh38.p13 Primary Assembly

      Range
      128572000..128576086 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_007354.2: Suppressed sequence

      Description
      NM_007354.2: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein.
    Support Center