Format

Send to:

Choose Destination
    • Showing Current items.

    Tmem44 transmembrane protein 44 [ Mus musculus (house mouse) ]

    Gene ID: 224090, updated on 12-Aug-2019

    Summary

    Official Symbol
    Tmem44provided by MGI
    Official Full Name
    transmembrane protein 44provided by MGI
    Primary source
    MGI:MGI:1924489
    See related
    Ensembl:ENSMUSG00000022537
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    B230220N21; 1700007N03Rik; 9330161C17Rik
    Expression
    Broad expression in CNS E18 (RPKM 16.0), whole brain E14.5 (RPKM 12.2) and 16 other tissues See more
    Orthologs

    Genomic context

    See Tmem44 in Genome Data Viewer
    Location:
    16; 16 B2
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    108 current GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (30511855..30550825, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 16 NC_000082.5 (30511941..30550664, complement)

    Chromosome 16 - NC_000082.6Genomic Context describing neighboring genes Neighboring gene ATPase type 13A3 Neighboring gene glycoprotein 5 (platelet) Neighboring gene uncharacterized LOC115488646 Neighboring gene large 60S subunit nuclear export GTPase 1 Neighboring gene family with sequence similarity 43, member A

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001357413.1NP_001344342.1  transmembrane protein 44 isoform 3

      Status: VALIDATED

      Source sequence(s)
      AC104885
    2. NM_001357414.1NP_001344343.1  transmembrane protein 44 isoform 1

      Status: VALIDATED

      Source sequence(s)
      AC104885
    3. NM_001357415.1NP_001344344.1  transmembrane protein 44 isoform 3

      Status: VALIDATED

      Source sequence(s)
      AC104885
    4. NM_001361297.1NP_001348226.1  transmembrane protein 44 isoform 4

      Status: VALIDATED

      Source sequence(s)
      AK048655, AK082652, BC059216, BC080307, CV562351
    5. NM_172614.3NP_766202.3  transmembrane protein 44 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC104885, AK048655
      Consensus CDS
      CCDS37310.1
      UniProtKB/TrEMBL
      E9Q4M0, Q8C820
      Related
      ENSMUSP00000123494.1, ENSMUST00000140402.7

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 108 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p6 C57BL/6J

    Genomic

    1. NC_000082.6 Reference GRCm38.p6 C57BL/6J

      Range
      30511855..30550825 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030249080.1XP_030104940.1  transmembrane protein 44 isoform X7

    2. XM_030249077.1XP_030104937.1  transmembrane protein 44 isoform X4

    3. XM_030249076.1XP_030104936.1  transmembrane protein 44 isoform X3

    4. XM_030249084.1XP_030104944.1  transmembrane protein 44 isoform X11

    5. XM_030249083.1XP_030104943.1  transmembrane protein 44 isoform X11

    6. XM_030249082.1XP_030104942.1  transmembrane protein 44 isoform X10

    7. XM_030249081.1XP_030104941.1  transmembrane protein 44 isoform X9

    8. XM_030249075.1XP_030104935.1  transmembrane protein 44 isoform X2

    9. XM_030249079.1XP_030104939.1  transmembrane protein 44 isoform X6

    10. XM_030249078.1XP_030104938.1  transmembrane protein 44 isoform X5

    11. XM_017316959.2XP_017172448.1  transmembrane protein 44 isoform X1

    12. XM_017316961.2XP_017172450.1  transmembrane protein 44 isoform X8

    13. XM_017316960.2XP_017172449.1  transmembrane protein 44 isoform X8

    Support Center