Format

Send to:

Choose Destination
    • Showing Current items.

    C1QL2 complement C1q like 2 [ Homo sapiens (human) ]

    Gene ID: 165257, updated on 17-Jun-2019

    Summary

    Official Symbol
    C1QL2provided by HGNC
    Official Full Name
    complement C1q like 2provided by HGNC
    Primary source
    HGNC:HGNC:24181
    See related
    Ensembl:ENSG00000144119 MIM:614330
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    CTRP10; C1QTNF10
    Expression
    Low expression observed in reference dataset See more
    Orthologs

    Genomic context

    See C1QL2 in Genome Data Viewer
    Location:
    2q14.2
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    109.20190607 current GRCh38.p13 (GCF_000001405.39) 2 NC_000002.12 (119156243..119158751, complement)
    105 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (119913819..119916471, complement)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene engrailed homeobox 1 Neighboring gene macrophage receptor with collagenous structure Neighboring gene uncharacterized LOC107985941 Neighboring gene RNA, 7SL, cytoplasmic 468, pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Phenotypes

    NHGRI GWAS Catalog

    Description
    Genetic Loci Associated with Circulating Levels of Very Long-Chain Saturated Fatty Acids.
    NHGRI GWA Catalog

    General gene information

    Markers

    Homology

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    identical protein binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    protein complex oligomerization IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    collagen trimer IEA
    Inferred from Electronic Annotation
    more info
     
    extracellular region IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    complement C1q-like protein 2
    Names
    C1q and tumor necrosis factor-related protein 10
    C1q-domain containing protein
    C1q/TNF-related protein 10
    complement component 1, q subcomponent-like 2

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_182528.4NP_872334.2  complement C1q-like protein 2 precursor

      See identical proteins and their annotated locations for NP_872334.2

      Status: VALIDATED

      Source sequence(s)
      AC016673
      Consensus CDS
      CCDS42737.1
      UniProtKB/Swiss-Prot
      Q7Z5L3
      Related
      ENSP00000272520.3, ENST00000272520.4
      Conserved Domains (1) summary
      pfam00386
      Location:160284
      C1q; C1q domain

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p13 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p13 Primary Assembly

      Range
      119156243..119158751 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Support Center