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    LINC00599 long intergenic non-protein coding RNA 599 [ Homo sapiens (human) ]

    Gene ID: 157627, updated on 8-Jul-2019

    Summary

    Official Symbol
    LINC00599provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 599provided by HGNC
    Primary source
    HGNC:HGNC:27231
    See related
    Ensembl:ENSG00000253230
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    Rncr3
    Expression
    Restricted expression toward brain (RPKM 17.1) See more

    Genomic context

    See LINC00599 in Genome Data Viewer
    Location:
    8p23.1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    109.20190607 current GRCh38.p13 (GCF_000001405.39) 8 NC_000008.11 (9900064..9903329, complement)
    105 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (9757574..9760839, complement)

    Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene DENN domain containing 4A pseudogene Neighboring gene tankyrase Neighboring gene microRNA 597 Neighboring gene microRNA 124-1 Neighboring gene uncharacterized LOC105379234

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    • Alzheimers Disease, organism-specific biosystem (from WikiPathways)
      Alzheimers Disease, organism-specific biosystemThis pathway displays current genes, proteolytic events and other processes associated with the progression of Alzheimer's disease. This pathway was adapted from KEGG on 10/7/2011. Note: mitochondria...

    General gene information

    Markers

    Other Names

    • retinal non-coding RNA 3

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_024281.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AF052108, AL832535, BC042097, CN430287, DA113430, DA155571
      Related
      ENST00000667251.1

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p13 Primary Assembly

    Genomic

    1. NC_000008.11 Reference GRCh38.p13 Primary Assembly

      Range
      9900064..9903329 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p13 PATCHES

    Genomic

    1. NW_018654717.1 Reference GRCh38.p13 PATCHES

      Range
      3445395..3448660
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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