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    FAM163A family with sequence similarity 163 member A [ Homo sapiens (human) ]

    Gene ID: 148753, updated on 17-Jun-2019

    Summary

    Official Symbol
    FAM163Aprovided by HGNC
    Official Full Name
    family with sequence similarity 163 member Aprovided by HGNC
    Primary source
    HGNC:HGNC:28274
    See related
    Ensembl:ENSG00000143340 Ensembl:ENSG00000243062 MIM:611727
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    NDSP; C1orf76
    Expression
    Biased expression in testis (RPKM 5.6), adrenal (RPKM 3.7) and 9 other tissues See more
    Orthologs

    Genomic context

    See FAM163A in Genome Data Viewer
    Location:
    1q25.2
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    109.20190607 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (179727763..179816198)
    105 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (179696912..179785333)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 pseudogene Neighboring gene tudor domain containing 5 Neighboring gene uncharacterized LOC105371635 Neighboring gene uncharacterized LOC105371634 Neighboring gene microRNA 12116 Neighboring gene long intergenic non-protein coding RNA 2818 Neighboring gene torsin 1A interacting protein 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • MGC16664

    Gene Ontology Provided by GOA

    Component Evidence Code Pubs
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    protein FAM163A
    Names
    cebelin
    neuroblastoma derived secretory protein

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001329712.2NP_001316641.1  protein FAM163A

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longest transcript. Variants 1-9 all encode the same protein.
      Source sequence(s)
      BC009382, DB139576
      Consensus CDS
      CCDS1333.1
      UniProtKB/Swiss-Prot
      Q96GL9
      Conserved Domains (1) summary
      pfam15069
      Location:1166
      FAM163; FAM163 family
    2. NM_001329713.2NP_001316642.1  protein FAM163A

      Status: VALIDATED

      Description
      Transcript Variant: This variant (3) encodes the same protein as variants 1, 2, and 4-9.
      Source sequence(s)
      AK292432, AL359853, BC009382, DB066264
      Consensus CDS
      CCDS1333.1
      UniProtKB/Swiss-Prot
      Q96GL9
      Conserved Domains (1) summary
      pfam15069
      Location:1166
      FAM163; FAM163 family
    3. NM_001329714.2NP_001316643.1  protein FAM163A

      Status: VALIDATED

      Description
      Transcript Variant: This variant (4) encodes the same protein as variants 1-3 and 5-9.
      Source sequence(s)
      BC009382, DB066264, DB089377
      Consensus CDS
      CCDS1333.1
      UniProtKB/Swiss-Prot
      Q96GL9
      Conserved Domains (1) summary
      pfam15069
      Location:1166
      FAM163; FAM163 family
    4. NM_001329715.2NP_001316644.1  protein FAM163A

      Status: VALIDATED

      Description
      Transcript Variant: This variant (5) encodes the same protein as variants 1-4 and 6-9.
      Source sequence(s)
      AL359853, BC009382, DB091482, HY036705
      Consensus CDS
      CCDS1333.1
      UniProtKB/Swiss-Prot
      Q96GL9
      Conserved Domains (1) summary
      pfam15069
      Location:1166
      FAM163; FAM163 family
    5. NM_001329716.2NP_001316645.1  protein FAM163A

      Status: VALIDATED

      Description
      Transcript Variant: This variant (6) encodes the same protein as variants 1-5 and 7-9.
      Source sequence(s)
      AL359853, BC009382, DB091482, HY036705
      Consensus CDS
      CCDS1333.1
      UniProtKB/Swiss-Prot
      Q96GL9
      Conserved Domains (1) summary
      pfam15069
      Location:1166
      FAM163; FAM163 family
    6. NM_001329717.2NP_001316646.1  protein FAM163A

      Status: VALIDATED

      Description
      Transcript Variant: This variant (7) encodes the same protein as variants 1-6, 8, and 9.
      Source sequence(s)
      BC009382, DA416655
      Consensus CDS
      CCDS1333.1
      UniProtKB/Swiss-Prot
      Q96GL9
      Conserved Domains (1) summary
      pfam15069
      Location:1166
      FAM163; FAM163 family
    7. NM_001329718.2NP_001316647.1  protein FAM163A

      Status: VALIDATED

      Description
      Transcript Variant: This variant (8) encodes the same protein as variants 1-7 and 9.
      Source sequence(s)
      AK310711, AL359853, BC009382
      Consensus CDS
      CCDS1333.1
      UniProtKB/Swiss-Prot
      Q96GL9
      Conserved Domains (1) summary
      pfam15069
      Location:1166
      FAM163; FAM163 family
    8. NM_001329719.2NP_001316648.1  protein FAM163A

      Status: VALIDATED

      Description
      Transcript Variant: This variant (9) encodes the same protein as variants 1-8.
      Source sequence(s)
      AL359853, BC009382, DA402650
      Consensus CDS
      CCDS1333.1
      UniProtKB/Swiss-Prot
      Q96GL9
      Conserved Domains (1) summary
      pfam15069
      Location:1166
      FAM163; FAM163 family
    9. NM_173509.3NP_775780.1  protein FAM163A

      See identical proteins and their annotated locations for NP_775780.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) encodes the same protein as variants 1 and 3-9.
      Source sequence(s)
      BC009382
      Consensus CDS
      CCDS1333.1
      UniProtKB/Swiss-Prot
      Q96GL9
      Related
      ENSP00000354891.4, ENST00000341785.4
      Conserved Domains (1) summary
      pfam15069
      Location:1166
      FAM163; FAM163 family

    RNA

    1. NR_138086.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL359853
      Related
      ENST00000451471.1
    2. NR_138087.2 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      DB092551, DB151643
    3. NR_138088.2 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      DB061956, DB066264, DB151643
    4. NR_138089.2 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      BC009382, DB151643
    5. NR_138090.2 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL359853
      Related
      ENST00000423879.5

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p13 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

      Range
      179727763..179816198
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006711177.1XP_006711240.1  protein FAM163A isoform X1

      See identical proteins and their annotated locations for XP_006711240.1

      UniProtKB/Swiss-Prot
      Q96GL9
      Conserved Domains (1) summary
      pfam15069
      Location:1166
      FAM163; FAM163 family
    2. XM_017000393.1XP_016855882.1  protein FAM163A isoform X1

      UniProtKB/Swiss-Prot
      Q96GL9
      Conserved Domains (1) summary
      pfam15069
      Location:1166
      FAM163; FAM163 family
    3. XM_017000389.1XP_016855878.1  protein FAM163A isoform X1

      UniProtKB/Swiss-Prot
      Q96GL9
      Conserved Domains (1) summary
      pfam15069
      Location:1166
      FAM163; FAM163 family
    4. XM_017000387.1XP_016855876.1  protein FAM163A isoform X1

      UniProtKB/Swiss-Prot
      Q96GL9
      Conserved Domains (1) summary
      pfam15069
      Location:1166
      FAM163; FAM163 family
    5. XM_017000386.1XP_016855875.1  protein FAM163A isoform X1

      UniProtKB/Swiss-Prot
      Q96GL9
      Conserved Domains (1) summary
      pfam15069
      Location:1166
      FAM163; FAM163 family
    6. XM_017000391.1XP_016855880.1  protein FAM163A isoform X1

      UniProtKB/Swiss-Prot
      Q96GL9
      Conserved Domains (1) summary
      pfam15069
      Location:1166
      FAM163; FAM163 family
    7. XM_024453399.1XP_024309167.1  protein FAM163A isoform X1

      Conserved Domains (1) summary
      pfam15069
      Location:1166
      FAM163; FAM163 family
    8. XM_017000390.1XP_016855879.1  protein FAM163A isoform X1

      UniProtKB/Swiss-Prot
      Q96GL9
      Conserved Domains (1) summary
      pfam15069
      Location:1166
      FAM163; FAM163 family
    9. XM_017000388.1XP_016855877.1  protein FAM163A isoform X1

      UniProtKB/Swiss-Prot
      Q96GL9
      Conserved Domains (1) summary
      pfam15069
      Location:1166
      FAM163; FAM163 family
    10. XM_006711174.2XP_006711237.1  protein FAM163A isoform X1

      See identical proteins and their annotated locations for XP_006711237.1

      UniProtKB/Swiss-Prot
      Q96GL9
      Conserved Domains (1) summary
      pfam15069
      Location:1166
      FAM163; FAM163 family
    11. XM_006711175.2XP_006711238.1  protein FAM163A isoform X1

      See identical proteins and their annotated locations for XP_006711238.1

      UniProtKB/Swiss-Prot
      Q96GL9
      Conserved Domains (1) summary
      pfam15069
      Location:1166
      FAM163; FAM163 family
    12. XM_011509217.1XP_011507519.1  protein FAM163A isoform X1

      See identical proteins and their annotated locations for XP_011507519.1

      UniProtKB/Swiss-Prot
      Q96GL9
      Conserved Domains (1) summary
      pfam15069
      Location:1166
      FAM163; FAM163 family
    13. XM_017000392.1XP_016855881.1  protein FAM163A isoform X1

      UniProtKB/Swiss-Prot
      Q96GL9
      Conserved Domains (1) summary
      pfam15069
      Location:1166
      FAM163; FAM163 family
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