U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    Gnrhr gonadotropin releasing hormone receptor [ Mus musculus (house mouse) ]

    Gene ID: 14715, updated on 21-Apr-2024

    Summary

    Official Symbol
    Gnrhrprovided by MGI
    Official Full Name
    gonadotropin releasing hormone receptorprovided by MGI
    Primary source
    MGI:MGI:95790
    See related
    Ensembl:ENSMUSG00000029255 AllianceGenome:MGI:95790
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Predicted to enable gonadotropin-releasing hormone receptor activity; growth hormone-releasing hormone receptor activity; and peptide binding activity. Predicted to be involved in G protein-coupled receptor signaling pathway and negative regulation of cell population proliferation. Predicted to act upstream of or within signal transduction. Predicted to be located in plasma membrane. Predicted to be integral component of plasma membrane. Is expressed in several structures, including adenohypophysis; jaw; mandibular process; and ovary. Used to study hypogonadotropic hypogonadism 7 with or without anosmia. Human ortholog(s) of this gene implicated in hypogonadotropic hypogonadism 7 with or without anosmia. Orthologous to human GNRHR (gonadotropin releasing hormone receptor). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Low expression observed in reference dataset See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Location:
    5 E1; 5 43.56 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (86328613..86345760, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (86180754..86197901, complement)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E2747 Neighboring gene predicted gene, 24524 Neighboring gene signal transducing adaptor family member 1 Neighboring gene ubiquitin-like modifier activating enzyme 6 Neighboring gene STARR-seq mESC enhancer starr_13544 Neighboring gene STARR-positive B cell enhancer ABC_E10326 Neighboring gene transmembrane protease, serine 11c Neighboring gene STARR-seq mESC enhancer starr_13545 Neighboring gene predicted gene, 25473 Neighboring gene transmembrane protease, serine 11d Neighboring gene STARR-seq mESC enhancer starr_13546 Neighboring gene STARR-seq mESC enhancer starr_13547 Neighboring gene predicted gene, 35367 Neighboring gene STARR-seq mESC enhancer starr_13548

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Gene trapped (1) 
    • Targeted (6)  1 citation
    • Chemically induced (ENU) (1)  1 citation
    • Endonuclease-mediated (4) 

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables gonadotropin-releasing hormone receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables growth hormone-releasing hormone receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables peptide binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables protein-hormone receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in G protein-coupled receptor signaling pathway ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cellular response to hormone stimulus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in negative regulation of cell population proliferation ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within signal transduction IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    gonadotropin-releasing hormone receptor
    Names
    gnRH receptor

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001310651.1NP_001297580.1  gonadotropin-releasing hormone receptor isoform 2

      See identical proteins and their annotated locations for NP_001297580.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) lacks an alternate coding exon, which results in a frameshift, compared to variant 1. The encoded isoform (2) has a shorter, distinct C-terminus compared to isoform 1.
      Source sequence(s)
      AC107634
      Consensus CDS
      CCDS80313.1
      UniProtKB/TrEMBL
      A0A192B0U8, D3Z6P7
      Related
      ENSMUSP00000108999.2, ENSMUST00000113372.2
      Conserved Domains (1) summary
      pfam00001
      Location:76174
      7tm_1; 7 transmembrane receptor (rhodopsin family)
    2. NM_001310653.1NP_001297582.1  gonadotropin-releasing hormone receptor isoform 3

      See identical proteins and their annotated locations for NP_001297582.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (3) lacks the 3' exon and its transcription extends past a splice site used in variant 1, resulting in a distinct 3' coding region and 3' UTR. The encoded isoform (3) has a distinct, shorter C-terminus compared to isoform 1.
      Source sequence(s)
      AC107634
      Consensus CDS
      CCDS84897.1
      UniProtKB/TrEMBL
      Q6P8H4
      Related
      ENSMUSP00000092238.3, ENSMUST00000094654.3
      Conserved Domains (1) summary
      pfam00001
      Location:76247
      7tm_1; 7 transmembrane receptor (rhodopsin family)
    3. NM_010323.2NP_034453.1  gonadotropin-releasing hormone receptor isoform 1

      See identical proteins and their annotated locations for NP_034453.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
      Source sequence(s)
      AC107634, L01119
      Consensus CDS
      CCDS19379.1
      UniProtKB/Swiss-Prot
      Q01776, Q61611
      Related
      ENSMUSP00000031172.9, ENSMUST00000031172.9
      Conserved Domains (1) summary
      pfam00001
      Location:76322
      7tm_1; 7 transmembrane receptor (rhodopsin family)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      86328613..86345760 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017320667.1XP_017176156.1  gonadotropin-releasing hormone receptor isoform X1

      Conserved Domains (2) summary
      cd14964
      Location:3768
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:36174
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily