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    DHRS13 dehydrogenase/reductase 13 [ Homo sapiens (human) ]

    Gene ID: 147015, updated on 17-Jun-2019

    Summary

    Official Symbol
    DHRS13provided by HGNC
    Official Full Name
    dehydrogenase/reductase 13provided by HGNC
    Primary source
    HGNC:HGNC:28326
    See related
    Ensembl:ENSG00000167536 MIM:616157
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    SDR7C5
    Expression
    Broad expression in bone marrow (RPKM 14.4), prostate (RPKM 8.4) and 25 other tissues See more
    Orthologs

    Genomic context

    See DHRS13 in Genome Data Viewer
    Location:
    17q11.2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    109.20190607 current GRCh38.p13 (GCF_000001405.39) 17 NC_000017.11 (28897781..28903079, complement)
    105 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (27224799..27230089, complement)

    Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene microRNA 4732 Neighboring gene flotillin 2 Neighboring gene PHD finger protein 12 Neighboring gene uncharacterized LOC101927018 Neighboring gene uncharacterized LOC105371716 Neighboring gene seizure related 6 homolog

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • MGC23280

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    oxidation-reduction process IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    extracellular region IEA
    Inferred from Electronic Annotation
    more info
     
    membrane HDA PubMed 

    General protein information

    Preferred Names
    dehydrogenase/reductase SDR family member 13
    Names
    dehydrogenase/reductase (SDR family) member 13
    short chain dehydrogenase/reductase family 7C member 5

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_144683.4NP_653284.2  dehydrogenase/reductase SDR family member 13 precursor

      See identical proteins and their annotated locations for NP_653284.2

      Status: VALIDATED

      Source sequence(s)
      AC024267, AY358566, BQ052759
      Consensus CDS
      CCDS11246.2
      UniProtKB/Swiss-Prot
      Q6UX07
      Related
      ENSP00000368173.4, ENST00000378895.9
      Conserved Domains (1) summary
      cd05327
      Location:36304
      retinol-DH_like_SDR_c_like; retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p13 Primary Assembly

    Genomic

    1. NC_000017.11 Reference GRCh38.p13 Primary Assembly

      Range
      28897781..28903079 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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