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    SOWAHA sosondowah ankyrin repeat domain family member A [ Homo sapiens (human) ]

    Gene ID: 134548, updated on 17-Jun-2019

    Summary

    Official Symbol
    SOWAHAprovided by HGNC
    Official Full Name
    sosondowah ankyrin repeat domain family member Aprovided by HGNC
    Primary source
    HGNC:HGNC:27033
    See related
    Ensembl:ENSG00000198944
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    ANKRD43
    Orthologs

    Genomic context

    See SOWAHA in Genome Data Viewer
    Location:
    5q31.1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    109.20190607 current GRCh38.p13 (GCF_000001405.39) 5 NC_000005.10 (132813302..132816786)
    105 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (132149033..132152489)

    Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene kinesin family member 3A Neighboring gene septin 8 Neighboring gene cyclin I family member 2 Neighboring gene laforin-like Neighboring gene shroom family member 1 Neighboring gene RNA, U7 small nuclear 15 pseudogene

    Genomic regions, transcripts, and products

    HIV-1 interactions

    Replication interactions

    Interaction Pubs
    Knockdown of sosondowah ankyrin repeat domain family member A (SOWAHA; ANKRD43) by siRNA inhibits HIV-1 replication in HeLa-derived TZM-bl cells PubMed

    Go to the HIV-1, Human Interaction Database

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    General protein information

    Preferred Names
    ankyrin repeat domain-containing protein SOWAHA
    Names
    ankyrin repeat domain-containing protein 43
    protein sosondowah homolog A

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_175873.6NP_787069.4  ankyrin repeat domain-containing protein SOWAHA precursor

      Status: VALIDATED

      Source sequence(s)
      AC004775, KC877113
      Consensus CDS
      CCDS43361.1
      Related
      ENSP00000367965.2, ENST00000378693.3
      Conserved Domains (3) summary
      cd00204
      Location:346438
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam13637
      Location:346405
      Ank_4; Ankyrin repeats (many copies)
      sd00045
      Location:345382
      ANK; ANK repeat [structural motif]

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p13 Primary Assembly

    Genomic

    1. NC_000005.10 Reference GRCh38.p13 Primary Assembly

      Range
      132813302..132816786
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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