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    AHSA2P activator of HSP90 ATPase homolog 2, pseudogene [ Homo sapiens (human) ]

    Gene ID: 130872, updated on 17-Jun-2019

    Summary

    Official Symbol
    AHSA2Pprovided by HGNC
    Official Full Name
    activator of HSP90 ATPase homolog 2, pseudogeneprovided by HGNC
    Primary source
    HGNC:HGNC:20437
    See related
    Ensembl:ENSG00000173209
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    AHA1; Hch1; AHSA2
    Expression
    Ubiquitous expression in spleen (RPKM 24.2), lymph node (RPKM 21.9) and 25 other tissues See more
    Orthologs

    Genomic context

    See AHSA2P in Genome Data Viewer
    Location:
    2p15
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    109.20190607 current GRCh38.p13 (GCF_000001405.39) 2 NC_000002.12 (61177418..61188925)
    105 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (61404553..61415240)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105374758 Neighboring gene uncharacterized LOC339803 Neighboring gene chromosome 2 open reading frame 74 Neighboring gene ubiquitin specific peptidase 34 Neighboring gene small nucleolar RNA, H/ACA box 70B Neighboring gene uncharacterized LOC105377633

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Phenotypes

    NHGRI GWAS Catalog

    Description
    Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease.
    NHGRI GWA Catalog
    Multiple common variants for celiac disease influencing immune gene expression.
    NHGRI GWA Catalog

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Other Names

    • AHA1, activator of heat shock 90kDa protein ATPase homolog 2
    • activator of 90 kDa heat shock protein ATPase homolog 2
    • activator of HSP90 ATPase homolog 2

    Clone Names

    • FLJ34679, FLJ41715, DKFZp564C236

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    ATPase activator activity IEA
    Inferred from Electronic Annotation
    more info
     
    Hsp90 protein binding IEA
    Inferred from Electronic Annotation
    more info
     
    chaperone binding IEA
    Inferred from Electronic Annotation
    more info
     
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    positive regulation of ATPase activity IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_152210.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC016747, BC050395
    2. NR_152211.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AA856729, AC016747, BC030998
      Related
      ENST00000357022.6
    3. NR_152212.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AA856729, AC016747
    4. NR_152213.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AA856729, AC016747
      Related
      ENST00000642732.1
    5. NR_152215.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AA856729, AC016747, BC063789
    6. NR_152216.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AA856729, AC016747, AK092505, BC063789

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p13 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p13 Primary Assembly

      Range
      61177418..61188925
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001321300.1: Suppressed sequence

      Description
      NM_001321300.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
    2. NM_001321301.1: Suppressed sequence

      Description
      NM_001321301.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
    3. NM_001321302.1: Suppressed sequence

      Description
      NM_001321302.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
    4. NM_001321303.1: Suppressed sequence

      Description
      NM_001321303.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
    5. NM_001321304.1: Suppressed sequence

      Description
      NM_001321304.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
    6. NM_001321305.1: Suppressed sequence

      Description
      NM_001321305.1: This RefSeq was removed because it is now thought that this gene is a pseudogene.
    7. NM_152392.4: Suppressed sequence

      Description
      NM_152392.4: This RefSeq was removed because it is now thought that this gene is a pseudogene.
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