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    C1orf194 chromosome 1 open reading frame 194 [ Homo sapiens (human) ]

    Gene ID: 127003, updated on 17-Jun-2019

    Summary

    Official Symbol
    C1orf194provided by HGNC
    Official Full Name
    chromosome 1 open reading frame 194provided by HGNC
    Primary source
    HGNC:HGNC:32331
    See related
    Ensembl:ENSG00000179902
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Restricted expression toward testis (RPKM 30.1) See more
    Orthologs

    Genomic context

    See C1orf194 in Genome Data Viewer
    Location:
    1p13.3
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    109.20190607 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (109105951..109113831, complement)
    105 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (109648573..109656484, complement)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene poly(rC) binding protein 1 pseudogene Neighboring gene small Cajal body-specific RNA 2 Neighboring gene KIAA1324 Neighboring gene seryl-tRNA synthetase

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    General gene information

    Homology

    General protein information

    Preferred Names
    uncharacterized protein C1orf194

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001122961.2NP_001116433.1  uncharacterized protein C1orf194 isoform 3

      See identical proteins and their annotated locations for NP_001116433.1

      Status: VALIDATED

      Source sequence(s)
      AL138933, BC127905, BG196327, BG772797
      Consensus CDS
      CCDS41364.1
      UniProtKB/Swiss-Prot
      Q5T5A4
      Related
      ENSP00000358965.4, ENST00000369949.8
      Conserved Domains (1) summary
      pfam12494
      Location:23115
      DUF3695; Protein of unknown function (DUF3695)
    2. NM_001245025.2NP_001231954.1  uncharacterized protein C1orf194 isoform 1

      Status: VALIDATED

      Source sequence(s)
      AL138933, AL356488
      Conserved Domains (1) summary
      pfam12494
      Location:35127
      DUF3695; Protein of unknown function (DUF3695)
    3. NM_001366200.2NP_001353129.1  uncharacterized protein C1orf194 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AL138933, AL356488
      Conserved Domains (1) summary
      pfam12494
      Location:33125
      DUF3695; Protein of unknown function (DUF3695)
    4. NM_001366201.2NP_001353130.1  uncharacterized protein C1orf194 isoform 4

      Status: VALIDATED

      Source sequence(s)
      AL138933, AL356488
      Conserved Domains (1) summary
      pfam12494
      Location:2488
      DUF3695; Protein of unknown function (DUF3695)
    5. NM_001366202.2NP_001353131.1  uncharacterized protein C1orf194 isoform 5

      Status: VALIDATED

      Source sequence(s)
      AL138933, AL356488
      Conserved Domains (1) summary
      pfam12494
      Location:676
      DUF3695; Protein of unknown function (DUF3695)

    RNA

    1. NR_158762.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL138933, AL356488
    2. NR_158763.2 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL138933, AL356488

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p13 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

      Range
      109105951..109113831 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011540647.2XP_011538949.1  uncharacterized protein C1orf194 isoform X1

      Conserved Domains (1) summary
      pfam12494
      Location:144236
      DUF3695; Protein of unknown function (DUF3695)
    2. XM_011540648.1XP_011538950.1  uncharacterized protein C1orf194 isoform X4

      Conserved Domains (1) summary
      pfam12494
      Location:144175
      DUF3695; Protein of unknown function (DUF3695)
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