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    NXPH3 neurexophilin 3 [ Homo sapiens (human) ]

    Gene ID: 11248, updated on 17-Jun-2019

    Summary

    Official Symbol
    NXPH3provided by HGNC
    Official Full Name
    neurexophilin 3provided by HGNC
    Primary source
    HGNC:HGNC:8077
    See related
    Ensembl:ENSG00000182575 MIM:604636
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    NPH3
    Expression
    Broad expression in brain (RPKM 6.5), endometrium (RPKM 3.8) and 18 other tissues See more
    Orthologs

    Genomic context

    See NXPH3 in Genome Data Viewer
    Location:
    17q21.33
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    109.20190607 current GRCh38.p13 (GCF_000001405.39) 17 NC_000017.11 (49575871..49583810)
    105 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (47653298..47661172)

    Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 2075 Neighboring gene uncharacterized LOC100288866 Neighboring gene nerve growth factor receptor Neighboring gene microRNA 6165 Neighboring gene uncharacterized LOC107984999 Neighboring gene speckle type BTB/POZ protein Neighboring gene solute carrier family 35 member B1

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    signaling receptor binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Process Evidence Code Pubs
    neuropeptide signaling pathway NAS
    Non-traceable Author Statement
    more info
    PubMed 
    Component Evidence Code Pubs
    extracellular region IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_007225.3NP_009156.2  neurexophilin-3 precursor

      See identical proteins and their annotated locations for NP_009156.2

      Status: VALIDATED

      Source sequence(s)
      AA325150, AB032985, AC006487
      Consensus CDS
      CCDS11550.1
      UniProtKB/Swiss-Prot
      O95157
      Related
      ENSP00000329295.5, ENST00000328741.5
      Conserved Domains (1) summary
      pfam06312
      Location:59252
      Neurexophilin; Neurexophilin

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p13 Primary Assembly

    Genomic

    1. NC_000017.11 Reference GRCh38.p13 Primary Assembly

      Range
      49575871..49583810
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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