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    RABAC1 Rab acceptor 1 [ Homo sapiens (human) ]

    Gene ID: 10567, updated on 17-Jun-2019

    Summary

    Official Symbol
    RABAC1provided by HGNC
    Official Full Name
    Rab acceptor 1provided by HGNC
    Primary source
    HGNC:HGNC:9794
    See related
    Ensembl:ENSG00000105404 MIM:604925
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    PRA1; YIP3; PRAF1
    Expression
    Ubiquitous expression in fat (RPKM 42.3), stomach (RPKM 42.2) and 25 other tissues See more
    Orthologs

    Genomic context

    See RABAC1 in Genome Data Viewer
    Location:
    19q13.2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    109.20190607 current GRCh38.p13 (GCF_000001405.39) 19 NC_000019.10 (41956683..41959321, complement)
    105 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (42460833..42463530, complement)

    Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene ETS domain-containing transcription factor ERF Neighboring gene uncharacterized LOC100505585 Neighboring gene ATPase Na+/K+ transporting subunit alpha 3 Neighboring gene glutamate ionotropic receptor kainate type subunit 5 Neighboring gene Sharpr-MPRA regulatory regions 411/7488 and 4104

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    HIV-1 interactions

    Protein interactions

    Protein Gene Interaction Pubs
    Envelope transmembrane glycoprotein gp41 env HIV-1 gp41 colocalizes and binds to prenylated Rab acceptor 1 (PRA1) PubMed

    Go to the HIV-1, Human Interaction Database

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    identical protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    proline-rich region binding IEA
    Inferred from Electronic Annotation
    more info
     
    protein C-terminus binding IEA
    Inferred from Electronic Annotation
    more info
     
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
     
    cell junction IEA
    Inferred from Electronic Annotation
    more info
     
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane HDA PubMed 
    plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    synaptic vesicle IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    prenylated Rab acceptor protein 1
    Names
    PRA1 domain family 1
    PRA1 family protein 1
    Rab acceptor 1 (prenylated)
    prenylated Rab acceptor 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_006423.3NP_006414.2  prenylated Rab acceptor protein 1

      See identical proteins and their annotated locations for NP_006414.2

      Status: VALIDATED

      Source sequence(s)
      AI376198, CF242972, DB454056
      Consensus CDS
      CCDS12593.1
      UniProtKB/Swiss-Prot
      Q9UI14
      Related
      ENSP00000222008.5, ENST00000222008.11
      Conserved Domains (1) summary
      pfam03208
      Location:40173
      PRA1; PRA1 family protein

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p13 Primary Assembly

    Genomic

    1. NC_000019.10 Reference GRCh38.p13 Primary Assembly

      Range
      41956683..41959321 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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