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    EGFLAM-AS2 EGFLAM antisense RNA 2 [ Homo sapiens (human) ]

    Gene ID: 100506475, updated on 17-Jun-2019

    Summary

    Official Symbol
    EGFLAM-AS2provided by HGNC
    Official Full Name
    EGFLAM antisense RNA 2provided by HGNC
    Primary source
    HGNC:HGNC:41168
    See related
    Ensembl:ENSG00000248572
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Restricted expression toward testis (RPKM 3.0) See more

    Genomic context

    See EGFLAM-AS2 in Genome Data Viewer
    Location:
    5p13.2-p13.1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    109.20190607 current GRCh38.p13 (GCF_000001405.39) 5 NC_000005.10 (38399814..38403471, complement)
    105 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (38399916..38403573, complement)

    Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene EGF like, fibronectin type III and laminin G domains Neighboring gene EGFLAM antisense RNA 4 Neighboring gene Sharpr-MPRA regulatory region 7458 Neighboring gene 60S ribosomal protein L27 pseudogene Neighboring gene uncharacterized LOC105374732

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    General gene information

    Markers

    Other Names

    • CTD-2108O9.2
    • EGFLAM antisense RNA 2 (non-protein coding)

    Clone Names

    • FLJ35959

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_102749.1 RNA Sequence

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript.
      Source sequence(s)
      AK093278, BX093664
    2. NR_102750.1 RNA Sequence

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) has an alternate 3' segment and is shorter, compared to variant 1.
      Source sequence(s)
      AI359548, DB029288
      Related
      ENST00000512603.5

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p13 Primary Assembly

    Genomic

    1. NC_000005.10 Reference GRCh38.p13 Primary Assembly

      Range
      38399814..38403471 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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