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    LOC100287072 ribosomal protein S6 kinase B1 pseudogene [ Homo sapiens (human) ]

    Gene ID: 100287072, updated on 15-Jun-2019

    Summary

    Gene symbol
    LOC100287072
    Gene description
    ribosomal protein S6 kinase B1 pseudogene
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Annotation information
    Annotation category: partial on reference assembly
    Expression
    Biased expression in testis (RPKM 1.5), lymph node (RPKM 0.2) and 5 other tissues See more

    Genomic context

    See LOC100287072 in Genome Data Viewer
    Location:
    17p11.2
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    109 current GRCh38.p12 (GCF_000001405.38) 17 NC_000017.11 (20716483..20737865)
    105 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (20615759..20641178)

    Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105371583 Neighboring gene cytospin B pseudogene Neighboring gene LCR17pD recombination region Neighboring gene ring finger protein, transmembrane 1 pseudogene 3 Neighboring gene heterogeneous nuclear ribonucleoprotein A1 pseudogene 19

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_073509.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC126365, DA322644, DB442616, EG328240

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p13 Primary Assembly

    Genomic

    1. NC_000017.11 Reference GRCh38.p13 Primary Assembly

      Range
      20716483..20737865
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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