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    LOC100132215 uncharacterized LOC100132215 [ Homo sapiens (human) ]

    Gene ID: 100132215, updated on 15-Jun-2019

    Summary

    Gene symbol
    LOC100132215
    Gene description
    uncharacterized LOC100132215
    See related
    Ensembl:ENSG00000231609
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Ubiquitous expression in ovary (RPKM 9.8), liver (RPKM 6.3) and 25 other tissues See more

    Genomic context

    See LOC100132215 in Genome Data Viewer
    Location:
    2p15
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    109 current GRCh38.p12 (GCF_000001405.38) 2 NC_000002.12 (63043922..63048521, complement)
    105 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (63271057..63275656, complement)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene EH domain binding protein 1 Neighboring gene ribosomal protein S20 pseudogene 9 Neighboring gene VISTA enhancer hs690 Neighboring gene VISTA enhancer hs1066 Neighboring gene orthodenticle homeobox 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_027069.1 RNA Sequence

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) is the longer transcript.
      Source sequence(s)
      BC047612
      Related
      ENST00000429952.5
    2. NR_033389.1 RNA Sequence

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) has an alternate 5' exon and is shorter, as compared to variant 1.
      Source sequence(s)
      AK295275, BC047612

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p13 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p13 Primary Assembly

      Range
      63043922..63048521 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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