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    MIR124-2HG MIR124-2 host gene [ Homo sapiens (human) ]

    Gene ID: 100130155, updated on 13-Feb-2019

    Summary

    Official Symbol
    MIR124-2HGprovided by HGNC
    Official Full Name
    MIR124-2 host geneprovided by HGNC
    Primary source
    HGNC:HGNC:48723
    See related
    Ensembl:ENSG00000254377
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    LINC00966
    Expression
    Restricted expression toward brain (RPKM 3.5) See more

    Genomic context

    See MIR124-2HG in Genome Data Viewer
    Location:
    8q12.3
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    109 current GRCh38.p12 (GCF_000001405.38) 8 NC_000008.11 (64373218..64387504)
    105 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (65285775..65291388)

    Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 1414 Neighboring gene uncharacterized LOC105375877 Neighboring gene cytochrome c oxidase subunit 6C pseudogene 8 Neighboring gene microRNA 124-2 Neighboring gene cytochrome c oxidase subunit NDUFA4 pseudogene Neighboring gene uncharacterized LOC401463 Neighboring gene basic helix-loop-helix family member e22

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General gene information

    Markers

    Other Names

    • MIR124-2 host gene (non-protein coding)
    • long intergenic non-protein coding RNA 966

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_034102.2 RNA Sequence

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) lacks an exon and includes an alternate 3' end, resulting in a shorter transcript compared to variant 1.
      Source sequence(s)
      AW162357, BM706891, BU726941, DB176551, R12755
      Related
      ENST00000520799.5
    2. NR_034103.2 RNA Sequence

      Status: VALIDATED

      Description
      Transcript Variant: This variant (4) contains alternate 5' and 3' exon structure, resulting in a shorter transcript, compared to variant 1.
      Source sequence(s)
      AW162357, BM717762, BU726941, DB176551
    3. NR_109792.1 RNA Sequence

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longest transcript.
      Source sequence(s)
      AC013492, AK124231, AK124256
    4. NR_109793.1 RNA Sequence

      Status: VALIDATED

      Description
      Transcript Variant: This variant (3) contains alternate 5' and 3' exon structure, resulting in a shorter transcript, compared to variant 1.
      Source sequence(s)
      AW162357, BQ639660, BU726941, BX096487, DB176551

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p12 Primary Assembly

    Genomic

    1. NC_000008.11 Reference GRCh38.p12 Primary Assembly

      Range
      64373218..64387504
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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