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    MAPT-IT1 MAPT intronic transcript 1 [ Homo sapiens (human) ]

    Gene ID: 100130148, updated on 17-Jun-2019

    Summary

    Official Symbol
    MAPT-IT1provided by HGNC
    Official Full Name
    MAPT intronic transcript 1provided by HGNC
    Primary source
    HGNC:HGNC:43741
    See related
    Ensembl:ENSG00000279685
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo

    Genomic context

    See MAPT-IT1 in Genome Data Viewer
    Location:
    17q21.31
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    109.20190607 current GRCh38.p13 (GCF_000001405.39) 17 NC_000017.11 (45895783..45898798)
    105 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (43973149..43976164)

    Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene LINC02210-CRHR1 readthrough Neighboring gene corticotropin releasing hormone receptor 1 Neighboring gene MAPT antisense RNA 1 Neighboring gene signal peptide peptidase like 2C Neighboring gene uncharacterized LOC105371800 Neighboring gene microtubule associated protein tau Neighboring gene saitohin

    Genomic regions, transcripts, and products

    General gene information

    Other Names

    • MAPT intronic transcript 1 (non-protein coding)

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_024560.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC010792, AK091698, BF108492, DA504438, DA789878
      Related
      ENST00000624111.2

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p13 Primary Assembly

    Genomic

    1. NC_000017.11 Reference GRCh38.p13 Primary Assembly

      Range
      45895783..45898798
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p13 ALT_REF_LOCI_1

    Genomic

    1. NT_167251.2 Reference GRCh38.p13 ALT_REF_LOCI_1

      Range
      889441..892431 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p13 ALT_REF_LOCI_2

    Genomic

    1. NT_187663.1 Reference GRCh38.p13 ALT_REF_LOCI_2

      Range
      597911..600926
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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