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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001290729.3 → NP_001277658.2 transcription initiation factor TFIID subunit 1 isoform 1
Status: VALIDATED
- Source sequence(s)
-
AL806534, AL831722
- Consensus CDS
-
CCDS85793.1
- UniProtKB/TrEMBL
- A0A067XG50, B1Q2W7
- Related
- ENSMUSP00000114765.3, ENSMUST00000149274.9
-
NM_001405959.2 → NP_001392888.2 transcription initiation factor TFIID subunit 1 isoform 2
Status: VALIDATED
- Source sequence(s)
-
AL806534, AL831722
- UniProtKB/Swiss-Prot
- A2AM32, A2AM33, O35361, Q3UPF3, Q3V223, Q505F9, Q80UV9, Q8BQH8, Q8BQQ7, Q8BR59, Q8C7N8, Q9WTW9, Q9WTX0, Q9WTX1
- Related
- ENSMUSP00000138159.2, ENSMUST00000143908.8
-
NM_001405960.2 → NP_001392889.2 transcription initiation factor TFIID subunit 1 isoform 3
Status: VALIDATED
- Source sequence(s)
-
AL806534, AL831722
- UniProtKB/Swiss-Prot
- A2AM32, A2AM33, O35361, Q3UPF3, Q3V223, Q505F9, Q80UV9, Q8BQH8, Q8BQQ7, Q8BR59, Q8C7N8, Q9WTW9, Q9WTX0, Q9WTX1
- Related
- ENSMUSP00000160012.1, ENSMUST00000249914.1
-
NM_001405961.2 → NP_001392890.2 transcription initiation factor TFIID subunit 1 isoform 4
Status: VALIDATED
- Source sequence(s)
-
AL806534, AL831722
- UniProtKB/Swiss-Prot
- A2AM32, A2AM33, O35361, Q3UPF3, Q3V223, Q505F9, Q80UV9, Q8BQH8, Q8BQQ7, Q8BR59, Q8C7N8, Q9WTW9, Q9WTX0, Q9WTX1
-
NM_001405962.2 → NP_001392891.2 transcription initiation factor TFIID subunit 1 isoform 5
Status: VALIDATED
- Source sequence(s)
-
AL806534, AL831722
- UniProtKB/Swiss-Prot
- A2AM32, A2AM33, O35361, Q3UPF3, Q3V223, Q505F9, Q80UV9, Q8BQH8, Q8BQQ7, Q8BR59, Q8C7N8, Q9WTW9, Q9WTX0, Q9WTX1
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000086.8 Reference GRCm39 C57BL/6J
- Range
-
100576335..100644635
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_036161973.1 → XP_036017866.1 transcription initiation factor TFIID subunit 1 isoform X9
- UniProtKB/TrEMBL
-
S4R1B9
- Conserved Domains (4) summary
-
- cd05511
Location:1533 → 1645
- Bromo_TFIID; Bromodomain, TFIID-like subfamily. Human TAFII250 (or TAF250) is the largest subunit of TFIID, a large multi-domain complex, which initiates the assembly of the transcription machinery. TAFII250 contains two bromodomains that specifically bind to ...
- pfam09247
Location:28 → 86
- TBP-binding; TATA box-binding protein binding
- pfam12157
Location:591 → 1054
- DUF3591; Protein of unknown function (DUF3591)
- pfam15288
Location:1287 → 1322
- zf-CCHC_6; Zinc knuckle
-
XM_017318518.3 → XP_017174007.1 transcription initiation factor TFIID subunit 1 isoform X10
- UniProtKB/TrEMBL
-
S4R1B9
- Conserved Domains (5) summary
-
- cd05511
Location:1411 → 1522
- Bromo_TFIID; Bromodomain, TFIID-like subfamily. Human TAFII250 (or TAF250) is the largest subunit of TFIID, a large multi-domain complex, which initiates the assembly of the transcription machinery. TAFII250 contains two bromodomains that specifically bind to ...
- pfam09247
Location:28 → 86
- TBP-binding; TATA box-binding protein binding
- pfam12157
Location:591 → 1054
- DUF3591; Protein of unknown function (DUF3591)
- pfam15288
Location:1287 → 1322
- zf-CCHC_6; Zinc knuckle
- cl02556
Location:1533 → 1612
- Bromodomain; Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine.
-
XM_017318512.2 → XP_017174001.1 transcription initiation factor TFIID subunit 1 isoform X1
- UniProtKB/TrEMBL
- A0A067XG50, B1Q2W7
- Conserved Domains (4) summary
-
- cd05511
Location:1533 → 1645
- Bromo_TFIID; Bromodomain, TFIID-like subfamily. Human TAFII250 (or TAF250) is the largest subunit of TFIID, a large multi-domain complex, which initiates the assembly of the transcription machinery. TAFII250 contains two bromodomains that specifically bind to ...
- pfam09247
Location:28 → 86
- TBP-binding; TATA box-binding protein binding
- pfam12157
Location:591 → 1054
- DUF3591; Protein of unknown function (DUF3591)
- pfam15288
Location:1287 → 1322
- zf-CCHC_6; Zinc knuckle
-
XM_017318515.3 → XP_017174004.1 transcription initiation factor TFIID subunit 1 isoform X6
- UniProtKB/TrEMBL
- A0A067XG50, B1Q2W7
- Conserved Domains (4) summary
-
- cd05511
Location:1533 → 1645
- Bromo_TFIID; Bromodomain, TFIID-like subfamily. Human TAFII250 (or TAF250) is the largest subunit of TFIID, a large multi-domain complex, which initiates the assembly of the transcription machinery. TAFII250 contains two bromodomains that specifically bind to ...
- pfam09247
Location:28 → 86
- TBP-binding; TATA box-binding protein binding
- pfam12157
Location:591 → 1054
- DUF3591; Protein of unknown function (DUF3591)
- pfam15288
Location:1287 → 1322
- zf-CCHC_6; Zinc knuckle
-
XM_017318513.3 → XP_017174002.1 transcription initiation factor TFIID subunit 1 isoform X2
- UniProtKB/Swiss-Prot
- A2AM32, A2AM33, O35361, Q3UPF3, Q3V223, Q505F9, Q80UV9, Q8BQH8, Q8BQQ7, Q8BR59, Q8C7N8, Q9WTW9, Q9WTX0, Q9WTX1
- Conserved Domains (4) summary
-
- cd05511
Location:1533 → 1645
- Bromo_TFIID; Bromodomain, TFIID-like subfamily. Human TAFII250 (or TAF250) is the largest subunit of TFIID, a large multi-domain complex, which initiates the assembly of the transcription machinery. TAFII250 contains two bromodomains that specifically bind to ...
- pfam09247
Location:28 → 86
- TBP-binding; TATA box-binding protein binding
- pfam12157
Location:591 → 1054
- DUF3591; Protein of unknown function (DUF3591)
- pfam15288
Location:1287 → 1322
- zf-CCHC_6; Zinc knuckle
-
XM_017318516.3 → XP_017174005.1 transcription initiation factor TFIID subunit 1 isoform X7
- UniProtKB/Swiss-Prot
- A2AM32, A2AM33, O35361, Q3UPF3, Q3V223, Q505F9, Q80UV9, Q8BQH8, Q8BQQ7, Q8BR59, Q8C7N8, Q9WTW9, Q9WTX0, Q9WTX1
- Conserved Domains (4) summary
-
- cd05511
Location:1533 → 1645
- Bromo_TFIID; Bromodomain, TFIID-like subfamily. Human TAFII250 (or TAF250) is the largest subunit of TFIID, a large multi-domain complex, which initiates the assembly of the transcription machinery. TAFII250 contains two bromodomains that specifically bind to ...
- pfam09247
Location:28 → 86
- TBP-binding; TATA box-binding protein binding
- pfam12157
Location:591 → 1054
- DUF3591; Protein of unknown function (DUF3591)
- pfam15288
Location:1287 → 1322
- zf-CCHC_6; Zinc knuckle
-
XM_006528051.4 → XP_006528114.1 transcription initiation factor TFIID subunit 1 isoform X4
- UniProtKB/TrEMBL
- A0A067XG50, B1Q2W7
- Conserved Domains (4) summary
-
- cd05511
Location:1507 → 1619
- Bromo_TFIID; Bromodomain, TFIID-like subfamily. Human TAFII250 (or TAF250) is the largest subunit of TFIID, a large multi-domain complex, which initiates the assembly of the transcription machinery. TAFII250 contains two bromodomains that specifically bind to ...
- pfam09247
Location:28 → 86
- TBP-binding; TATA box-binding protein binding
- pfam12157
Location:565 → 1028
- DUF3591; Protein of unknown function (DUF3591)
- pfam15288
Location:1261 → 1296
- zf-CCHC_6; Zinc knuckle
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_001081008.1: Suppressed sequence
- Description
- NM_001081008.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.