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    sncb synuclein, beta [ Danio rerio (zebrafish) ]

    Gene ID: 393944, updated on 28-Oct-2018

    Summary

    Official Symbol
    sncbprovided by ZNC
    Official Full Name
    synuclein, betaprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040426-1615
    See related
    Ensembl:ENSDARG00000104945
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Also known as
    zgc:66343
    Orthologs

    Genomic context

    See sncb in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 14 NC_007125.7 (50770537..50804042)
    105 previous assembly GRCz10 (GCF_000002035.5) 14 NC_007125.6 (45619305..45652810)

    Chromosome 14 - NC_007125.7Genomic Context describing neighboring genes Neighboring gene zinc transporter ZIP8-like Neighboring gene abhydrolase domain containing 18 Neighboring gene si:ch211-59p23.1 Neighboring gene G protein regulated inducer of neurite outgrowth 1

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General gene information

    Markers

    Homology

    Clone Names

    • MGC66343

    Gene Ontology Provided by ZFIN

    Process Evidence Code Pubs
    dopaminergic neuron differentiation IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    larval locomotory behavior IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    beta-synuclein
    Names
    zSyn-&beta
    zSynC

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_200969.1NP_957263.1  beta-synuclein

      See identical proteins and their annotated locations for NP_957263.1

      Status: PROVISIONAL

      Source sequence(s)
      BC055608
      UniProtKB/TrEMBL
      Q7SX92
      Related
      ENSDARP00000135627.1, ENSDART00000158723.3
      Conserved Domains (1) summary
      pfam01387
      Location:1115
      Synuclein; Synuclein

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007125.7 Reference GRCz11 Primary Assembly

      Range
      50770537..50804042
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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