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    Ptgdr prostaglandin D receptor [ Mus musculus (house mouse) ]

    Gene ID: 19214, updated on 26-Apr-2018
    Official Symbol
    Ptgdrprovided by MGI
    Official Full Name
    prostaglandin D receptorprovided by MGI
    Primary source
    MGI:MGI:102966
    See related
    Ensembl:ENSMUSG00000071489 Vega:OTTMUSG00000036408
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    DP; PGD
    Expression
    Biased expression in testis adult (RPKM 1.2), CNS E18 (RPKM 0.5) and 14 other tissues See more
    Orthologs
    See Ptgdr in Genome Data Viewer
    Location:
    14 C1; 14 22.59 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 14 NC_000080.6 (44851235..44859375, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 14 NC_000080.5 (45470910..45479050, complement)

    Chromosome 14 - NC_000080.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 34060 Neighboring gene predicted gene, 41141 Neighboring gene crumbs homolog 1 pseudogene Neighboring gene predicted gene, 34198 Neighboring gene predicted gene, 16976 Neighboring gene crumbs homolog 1 pseudogene Neighboring gene predicted gene, 41142 Neighboring gene microRNA 327

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    G-protein coupled receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    G-protein coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    prostacyclin receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    prostaglandin D receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    prostaglandin D receptor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    prostaglandin D receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    prostaglandin J receptor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    G-protein coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    adenosine metabolic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    adenylate cyclase-activating G-protein coupled receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    NOT adenylate cyclase-activating G-protein coupled receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    cellular response to prostaglandin D stimulus IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    inflammatory response IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    inflammatory response IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    male sex determination IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    positive regulation of cytosolic calcium ion concentration IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    signal transduction IEA
    Inferred from Electronic Annotation
    more info
     
    sleep IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane ISO
    Inferred from Sequence Orthology
    more info
     
    plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    Preferred Names
    prostaglandin D2 receptor
    Names
    PGD receptor
    PGD2 receptor
    prostanoid DP receptor

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_008962.4NP_032988.3  prostaglandin D2 receptor

      See identical proteins and their annotated locations for NP_032988.3

      Status: VALIDATED

      Source sequence(s)
      AK032488, BC132297
      Consensus CDS
      CCDS26971.1
      UniProtKB/Swiss-Prot
      P70263
      Related
      ENSMUSP00000093653.1, OTTMUSP00000051733, ENSMUST00000095959.1, OTTMUST00000093306
      Conserved Domains (1) summary
      pfam00001
      Location:58318
      7tm_1; 7 transmembrane receptor (rhodopsin family)

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000080.6 Reference GRCm38.p4 C57BL/6J

      Range
      44851235..44859375 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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