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    ephb4.S EPH receptor B4 S homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 100191023, updated on 8-Apr-2017
    Symbol
    ephb4.S
    Full Name
    EPH receptor B4 S homeolog
    Primary source
    Xenbase:XB-GENE-5881619
    Locus tag
    XELAEV_18019575mg
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    G51; htk; myk1; ephb4; ephb4b; tyro11; ephb4-a; ephb4-b
    Annotation information
    Annotation category: partial on reference assembly
    See ephb4.S in Genome Data Viewer
    Location:
    chromosome: 3L
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current Xenopus_laevis_v2 (GCF_001663975.1) 3L NC_030728.1 (142657255..142681910)
    100 current Xenopus_laevis_v2 (GCF_001663975.1) Unplaced Scaffold NW_016713071.1 (107..754)

    Chromosome 3L - NC_030728.1Genomic Context describing neighboring genes Neighboring gene 7SK snRNA methylphosphate capping enzyme-like Neighboring gene ephrin type-B receptor 4-like Neighboring gene SRY-box 15 L homeolog Neighboring gene mannose-P-dolichol utilization defect 1 protein-like

    Preferred Names
    EPH receptor B4 S homeolog
    Names
    eph receptor tyrosine kinase

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001136172.2NP_001129644.1  EPH receptor B4 S homeolog precursor

      See identical proteins and their annotated locations for NP_001129644.1

      Status: PROVISIONAL

      Source sequence(s)
      BC108541
      UniProtKB/TrEMBL
      Q32NP2
      Conserved Domains (8) summary
      cd05065
      Location:608876
      PTKc_EphR_B; Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors
      cd09554
      Location:905971
      SAM_EPH-B4; SAM domain of EPH-B4 subfamily of tyrosine kinase receptors
      smart00454
      Location:902967
      SAM; Sterile alpha motif
      cd10474
      Location:17196
      EphR_LBD_B4; Ligand Binding Domain of Ephrin type-B Receptor 4
      cd00063
      Location:324425
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam00041
      Location:432517
      fn3; Fibronectin type III domain
      pfam07714
      Location:613872
      Pkinase_Tyr; Protein tyrosine kinase
      pfam14575
      Location:545608
      EphA2_TM; Ephrin type-A receptor 2 transmembrane domain

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v2 Primary Assembly

    Genomic

    1. NC_030728.1 Reference Xenopus_laevis_v2 Primary Assembly

      Range
      142657255..142681910
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference Xenopus_laevis_v2 Primary Assembly

    Genomic

    1. NW_016713071.1 Reference Xenopus_laevis_v2 Primary Assembly

      Range
      107..754
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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