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    tnnt1.S troponin T1, slow skeletal type S homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 444636, updated on 8-Apr-2017

    Summary

    Official Symbol
    tnnt1.S
    Official Full Name
    troponin T1, slow skeletal type S homeolog
    Primary source
    Xenbase:XB-GENE-865468
    Locus tag
    XELAEV_18037689mg
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    Tnnt; tnnt1

    Genomic context

    See tnnt1.S in Genome Data Viewer
    Location:
    chromosome: 7S
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    100 current Xenopus_laevis_v2 (GCF_001663975.1) 7S NC_030737.1 (72774325..72829890)

    Chromosome 7S - NC_030737.1Genomic Context describing neighboring genes Neighboring gene synaptotagmin-1-like Neighboring gene troponin I3, cardiac type S homeolog Neighboring gene protein phosphatase 1 regulatory subunit 12C-like Neighboring gene EPS8 like 1 S homeolog

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_030737.1 Chromosome 7S Reference Xenopus_laevis_v2 Primary Assembly

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General protein information

    Preferred Names
    troponin T type 1 (skeletal, slow) S homeolog; troponin T1, slow skeletal type S homeolog

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001092738.1NP_001086207.1  troponin T1, slow skeletal type S homeolog

      See identical proteins and their annotated locations for NP_001086207.1

      Status: PROVISIONAL

      Source sequence(s)
      BC074325
      UniProtKB/TrEMBL
      Q6DKC5
      Conserved Domains (2) summary
      pfam00992
      Location:72208
      Troponin; Troponin
      pfam07795
      Location:79128
      DUF1635; Protein of unknown function (DUF1635)

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v2 Primary Assembly

    Genomic

    1. NC_030737.1 Reference Xenopus_laevis_v2 Primary Assembly

      Range
      72774325..72829890
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018226931.1XP_018082420.1  troponin T type 1 (skeletal, slow) S homeolog isoform X1

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