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    B230219D22Rik RIKEN cDNA B230219D22 gene [ Mus musculus (house mouse) ]

    Gene ID: 78521, updated on 27-Jan-2018

    Summary

    Official Symbol
    B230219D22Rikprovided by MGI
    Official Full Name
    RIKEN cDNA B230219D22 geneprovided by MGI
    Primary source
    MGI:MGI:1925771
    See related
    Ensembl:ENSMUSG00000045767
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AA119856; D530037I19Rik
    Expression
    Ubiquitous expression in CNS E18 (RPKM 24.8), limb E14.5 (RPKM 22.5) and 28 other tissues See more
    Orthologs

    Genomic context

    See B230219D22Rik in Genome Data Viewer
    Location:
    13; 13 B1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 13 NC_000079.6 (55693124..55703500)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 13 NC_000079.5 (55794485..55804861)

    Chromosome 13 - NC_000079.6Genomic Context describing neighboring genes Neighboring gene calcium modulating ligand Neighboring gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 Neighboring gene thioredoxin domain containing 15 Neighboring gene pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2 Neighboring gene RIKEN cDNA 4930451E10 gene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    UPF0461 protein C5orf24 homolog

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_181278.2NP_851795.1  UPF0461 protein C5orf24 homolog

      See identical proteins and their annotated locations for NP_851795.1

      Status: PREDICTED

      Source sequence(s)
      BC051430
      Consensus CDS
      CCDS26552.1
      UniProtKB/Swiss-Prot
      Q80X32
      Related
      ENSMUSP00000055271.8, ENSMUST00000057844.9

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000079.6 Reference GRCm38.p4 C57BL/6J

      Range
      55693124..55703500
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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