Format

Send to:

Choose Destination
    • Showing Current items.

    Poglut2 protein O-glucosyltransferase 2 [ Mus musculus (house mouse) ]

    Gene ID: 72050, updated on 16-Apr-2019

    Summary

    Official Symbol
    Poglut2provided by MGI
    Official Full Name
    protein O-glucosyltransferase 2provided by MGI
    Primary source
    MGI:MGI:1919300
    See related
    Ensembl:ENSMUSG00000026047
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    EP58; Kdel1; Kdelc1; 1810049A15Rik; 5730416C13Rik
    Expression
    Ubiquitous expression in limb E14.5 (RPKM 19.9), ovary adult (RPKM 16.5) and 28 other tissues See more
    Orthologs

    Genomic context

    See Poglut2 in Genome Data Viewer
    Location:
    1; 1 C1.1
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 1 NC_000067.6 (44106546..44118926, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 1 NC_000067.5 (44163391..44175618, complement)

    Chromosome 1 - NC_000067.6Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 168 Neighboring gene testis expressed 30 Neighboring gene basic, immunoglobulin-like variable motif containing Neighboring gene excision repair cross-complementing rodent repair deficiency, complementation group 5

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    UDP-glucosyltransferase activity ISO
    Inferred from Sequence Orthology
    more info
     
    UDP-xylosyltransferase activity ISO
    Inferred from Sequence Orthology
    more info
     
    glucosyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    protein xylosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    transferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    transferase activity, transferring glycosyl groups IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    protein O-linked glycosylation via serine ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
     
    endoplasmic reticulum lumen IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    endoplasmic reticulum lumen IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    protein O-glucosyltransferase 2; KDEL motif-containing protein 1
    Names
    ER protein 58
    ERp58
    KDEL (Lys-Asp-Glu-Leu) containing 1
    KDEL containing protein 1
    endoplasmic reticulum resident protein 58
    endoplasmic reticulum-resident KDEL protein
    protein O-xylosyltransferase POGLUT2
    NP_076134.1
    XP_006496352.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_023645.3NP_076134.1  protein O-glucosyltransferase 2 precursor

      See identical proteins and their annotated locations for NP_076134.1

      Status: PROVISIONAL

      Source sequence(s)
      AK035899
      Consensus CDS
      CCDS14929.1
      UniProtKB/Swiss-Prot
      Q9JHP7
      Related
      ENSMUSP00000064500.2, ENSMUST00000065767.8
      Conserved Domains (3) summary
      smart00557
      Location:29129
      IG_FLMN; Filamin-type immunoglobulin domains
      pfam00630
      Location:28127
      Filamin; Filamin/ABP280 repeat
      pfam05686
      Location:151484
      Glyco_transf_90; Glycosyl transferase family 90

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000067.6 Reference GRCm38.p4 C57BL/6J

      Range
      44106546..44118926 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006496289.3XP_006496352.1  KDEL motif-containing protein 1 isoform X1

      See identical proteins and their annotated locations for XP_006496352.1

      UniProtKB/Swiss-Prot
      Q9JHP7
      Conserved Domains (3) summary
      smart00557
      Location:29129
      IG_FLMN; Filamin-type immunoglobulin domains
      pfam00630
      Location:28127
      Filamin; Filamin/ABP280 repeat
      cl23835
      Location:151282
      Glyco_transf_90; Glycosyl transferase family 90
    Support Center