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    Tmbim1 transmembrane BAX inhibitor motif containing 1 [ Mus musculus (house mouse) ]

    Gene ID: 69660, updated on 31-Jan-2019

    Summary

    Official Symbol
    Tmbim1provided by MGI
    Official Full Name
    transmembrane BAX inhibitor motif containing 1provided by MGI
    Primary source
    MGI:MGI:1916910
    See related
    Ensembl:ENSMUSG00000006301
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    RECS1; C78899; Tmbib1; AA960455; AU024746; mKIAA4161; 2310061B02Rik
    Expression
    Broad expression in lung adult (RPKM 77.4), duodenum adult (RPKM 73.5) and 23 other tissues See more
    Orthologs

    Genomic context

    See Tmbim1 in Genome Data Viewer
    Location:
    1; 1 C3
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 1 NC_000067.6 (74288247..74304336, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 1 NC_000067.5 (74334821..74350910, complement)

    Chromosome 1 - NC_000067.6Genomic Context describing neighboring genes Neighboring gene G protein-coupled bile acid receptor 1 Neighboring gene predicted gene 28364 Neighboring gene angio-associated migratory protein Neighboring gene paroxysmal nonkinesiogenic dyskinesia Neighboring gene ciliogenesis associated TTC17 interacting protein Neighboring gene solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    Clone Names

    • KIAA4161

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    death receptor binding ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    Golgi apparatus ISO
    Inferred from Sequence Orthology
    more info
     
    endosome IEA
    Inferred from Electronic Annotation
    more info
     
    endosome membrane ISO
    Inferred from Sequence Orthology
    more info
     
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    intracellular membrane-bounded organelle ISO
    Inferred from Sequence Orthology
    more info
     
    lysosomal membrane ISO
    Inferred from Sequence Orthology
    more info
     
    lysosome IEA
    Inferred from Electronic Annotation
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    protein lifeguard 3
    Names
    responsive to centrifugal force and shear stress gene 1 protein
    transmembrane BAX inhibitor motif-containing protein 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_027154.5NP_081430.3  protein lifeguard 3

      See identical proteins and their annotated locations for NP_081430.3

      Status: VALIDATED

      Source sequence(s)
      AK152864, BQ031095, BY312755
      Consensus CDS
      CCDS15044.1
      UniProtKB/Swiss-Prot
      Q8BJZ3
      UniProtKB/TrEMBL
      Q3U717
      Related
      ENSMUSP00000016309.9, ENSMUST00000016309.15
      Conserved Domains (1) summary
      cd10428
      Location:87306
      LFG_like; Proteins similar to and including lifeguard (LFG), a putative regulator of apoptosis

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000067.6 Reference GRCm38.p4 C57BL/6J

      Range
      74288247..74304336 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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