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    1110008L16Rik RIKEN cDNA 1110008L16 gene [ Mus musculus (house mouse) ]

    Gene ID: 66132, updated on 18-Nov-2018

    Summary

    Official Symbol
    1110008L16Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 1110008L16 geneprovided by MGI
    Primary source
    MGI:MGI:1913382
    See related
    Ensembl:ENSMUSG00000021023 Vega:OTTMUSG00000044896
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Mrpp3; Kiaa0391; mKIAA0391
    Expression
    Ubiquitous expression in CNS E11.5 (RPKM 2.8), bladder adult (RPKM 2.7) and 28 other tissues See more
    Orthologs

    Genomic context

    See 1110008L16Rik in Genome Data Viewer
    Location:
    12; 12 C1
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 12 NC_000078.6 (55302637..55382492)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 12 NC_000078.5 (56403624..56483478)

    Chromosome 12 - NC_000078.6Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 1700047I17 gene 2 Neighboring gene predicted gene 2446 Neighboring gene signal recognition particle 54C Neighboring gene protein phosphatase 2, regulatory subunit B'', gamma Neighboring gene ribosomal protein L18A, pseudogene 1 Neighboring gene proteasome (prosome, macropain) subunit, alpha type 6 Neighboring gene mitochondrial import inner membrane translocase subunit Tim8 B pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Homology

    Clone Names

    • KIAA0391

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
     
    metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    nuclease activity IEA
    Inferred from Electronic Annotation
    more info
     
    ribonuclease P activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    ribonuclease P activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    mitochondrial tRNA 5'-end processing ISO
    Inferred from Sequence Orthology
    more info
     
    tRNA 5'-leader removal IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    tRNA processing IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    mitochondrial nucleoid IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    mitochondrial nucleoid IDA
    Inferred from Direct Assay
    more info
    PubMed 
    mitochondrial ribonuclease P complex ISO
    Inferred from Sequence Orthology
    more info
     
    mitochondrion IDA
    Inferred from Direct Assay
    more info
    PubMed 
    mitochondrion ISO
    Inferred from Sequence Orthology
    more info
     
    nucleus ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    mitochondrial ribonuclease P catalytic subunit
    Names
    mitochondrial RNase P protein 3
    mitochondrial ribonuclease P protein 3
    NP_079649.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_025373.1NP_079649.1  mitochondrial ribonuclease P catalytic subunit precursor

      See identical proteins and their annotated locations for NP_079649.1

      Status: VALIDATED

      Source sequence(s)
      AK031144, AK151976, AV233350
      Consensus CDS
      CCDS49068.1
      UniProtKB/Swiss-Prot
      Q8JZY4
      Related
      ENSMUSP00000021411.7, OTTMUSP00000065902, ENSMUST00000021411.14, OTTMUST00000117992
      Conserved Domains (2) summary
      sd00004
      Location:171201
      PPR; PPR repeat [structural motif]
      pfam16953
      Location:339575
      PRORP; Protein-only RNase P

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000078.6 Reference GRCm38.p4 C57BL/6J

      Range
      55302637..55382492
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_001780473.1 RNA Sequence

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