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    Mns1 meiosis-specific nuclear structural 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 363093, updated on 18-Nov-2018

    Summary

    Official Symbol
    Mns1provided by RGD
    Official Full Name
    meiosis-specific nuclear structural 1provided by RGD
    Primary source
    RGD:1549718
    See related
    Ensembl:ENSRNOG00000057867
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Expression
    Biased expression in Thymus (RPKM 183.8), Testes (RPKM 167.6) and 4 other tissues See more
    Orthologs

    Genomic context

    See Mns1 in Genome Data Viewer
    Location:
    8q24
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    106 current Rnor_6.0 (GCF_000001895.5) 8 NC_005107.4 (79054240..79075119)
    104 previous assembly Rnor_5.0 (GCF_000001895.4) 8 NC_005107.3 (74012277..74033156, complement)

    Chromosome 8 - NC_005107.4Genomic Context describing neighboring genes Neighboring gene zinc finger protein 280D Neighboring gene uncharacterized LOC103693138 Neighboring gene 60S ribosomal protein L35-like Neighboring gene G1/S-specific cyclin-D3-like Neighboring gene testis expressed 9 Neighboring gene uncharacterized LOC103693140

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • MGC94906

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    identical protein binding IEA
    Inferred from Electronic Annotation
    more info
     
    identical protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    cilium organization IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    cilium organization ISO
    Inferred from Sequence Orthology
    more info
     
    left/right axis specification IEA
    Inferred from Electronic Annotation
    more info
     
    left/right axis specification ISO
    Inferred from Sequence Orthology
    more info
     
    meiotic cell cycle IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of cilium assembly IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of cilium assembly ISO
    Inferred from Sequence Orthology
    more info
     
    spermatogenesis IEA
    Inferred from Electronic Annotation
    more info
     
    spermatogenesis ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    axoneme IEA
    Inferred from Electronic Annotation
    more info
     
    axoneme ISO
    Inferred from Sequence Orthology
    more info
     
    intermediate filament IEA
    Inferred from Electronic Annotation
    more info
     
    intermediate filament ISO
    Inferred from Sequence Orthology
    more info
     
    motile cilium IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    nuclear envelope IEA
    Inferred from Electronic Annotation
    more info
     
    nuclear envelope ISO
    Inferred from Sequence Orthology
    more info
     
    sperm flagellum IEA
    Inferred from Electronic Annotation
    more info
     
    sperm flagellum ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    meiosis-specific nuclear structural protein 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001007752.1NP_001007753.1  meiosis-specific nuclear structural protein 1

      See identical proteins and their annotated locations for NP_001007753.1

      Status: PROVISIONAL

      Source sequence(s)
      BC079390
      UniProtKB/Swiss-Prot
      Q6AXQ8
      Related
      ENSRNOP00000069371.1, ENSRNOT00000077613.1
      Conserved Domains (1) summary
      pfam13868
      Location:117462
      TPH; Trichohyalin-plectin-homology domain

    RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Rnor_6.0 Primary Assembly

    Genomic

    1. NC_005107.4 Reference Rnor_6.0 Primary Assembly

      Range
      79054240..79075119
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate Rn_Celera

    Genomic

    1. AC_000076.1 Alternate Rn_Celera

      Range
      68580276..68600965 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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