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    CYP89A6 cytochrome P450, family 87, subfamily A, polypeptide 6 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842802, updated on 15-Feb-2024

    Summary

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    Gene symbol
    CYP89A6
    Gene description
    cytochrome P450, family 87, subfamily A, polypeptide 6
    Primary source
    Araport:AT1G64940
    Locus tag
    AT1G64940
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ''cytochrome P450; cytochrome P450; F13O11.24; F13O11_24; family 87; polypeptide 6; polypeptide 6''; subfamily A
    Summary
    member of CYP89A
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_003070.9 (24123789..24125514)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene UDP-Glycosyltransferase superfamily protein Neighboring gene cytochrome P450, family 87, subfamily A, polypeptide 7 Neighboring gene cytochrome P450, family 89, subfamily A, polypeptide 5 Neighboring gene ARM repeat superfamily protein Neighboring gene gamma-tocopherol methyltransferase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_105168.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    cytochrome P450, family 87, subfamily A, polypeptide 6
    NP_176674.1
    • ''cytochrome P450, family 87, subfamily A, polypeptide 6'' (CYP89A6); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 89, subfamily A, polypeptide 5 (TAIR:AT1G64950.1); Has 33831 Blast hits to 33673 proteins in 1720 species: Archae - 52; Bacteria - 4308; Metazoa - 11763; Fungi - 7071; Plants - 9227; Viruses - 3; Other Eukaryotes - 1407 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      24123789..24125514
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105168.2 → NP_176674.1  cytochrome P450, family 87, subfamily A, polypeptide 6 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176674.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WSC0, A0A7G2E043, Q9XIQ2
      Conserved Domains (1) summary
      cd11075
      Location:68 → 502
      CYP77_89; cytochrome P450 families 77 and 89, and similar cytochrome P450s
    Nucleotide Protein
    Heading Accession and Version

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