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    AT5G50330 Protein kinase superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835099, updated on 15-Feb-2024

    Summary

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    Gene symbol
    AT5G50330
    Gene description
    Protein kinase superfamily protein
    Primary source
    Araport:AT5G50330
    Locus tag
    AT5G50330
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MXI22.4; MXI22_4
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    12
    Sequence:
    Chromosome: 5; NC_003076.8 (20485134..20488702, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Galactose oxidase/kelch repeat superfamily protein Neighboring gene pseudo Neighboring gene radical SAM domain-containing protein / GCN5-related N-acetyltransferase (GNAT) family protein Neighboring gene uncharacterized protein Neighboring gene DNA repair protein RadA-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714
    3. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001125935.2
    NM_124413.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in plastid HDA PubMed 

    General protein information

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    Preferred Names
    Protein kinase superfamily protein
    NP_001119407.1
    • Protein kinase superfamily protein; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G24810.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_199844.3
    • Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Protein kinase, catalytic domain (InterPro:IPR000719), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G24810.2); Has 9594 Blast hits to 9572 proteins in 1815 species: Archae - 124; Bacteria - 4421; Metazoa - 409; Fungi - 573; Plants - 708; Viruses - 16; Other Eukaryotes - 3343 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      20485134..20488702 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_124413.4 → NP_199844.3  Protein kinase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199844.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654GA01, A0A7G2FLL7, Q0WSU9
      Conserved Domains (1) summary
      cd05121
      Location:103 → 359
      ABC1_ADCK3-like; Activator of bc1 complex (ABC1) kinases (also called aarF domain containing kinase 3) and similar proteins

    2. NM_001125935.2 → NP_001119407.1  Protein kinase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001119407.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2FLL7, B3H756
      Conserved Domains (1) summary
      cd05121
      Location:103 → 343
      ABC1_ADCK3-like; Activator of bc1 complex (ABC1) kinases (also called aarF domain containing kinase 3) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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