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    AT4G35870 early-responsive to dehydration stress protein (ERD4) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829741, updated on 15-Oct-2023

    Summary

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    Gene symbol
    AT4G35870
    Gene description
    early-responsive to dehydration stress protein (ERD4)
    Primary source
    Araport:AT4G35870
    Locus tag
    AT4G35870
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F4B14.140; F4B14_140
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    Genomic context

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    See AT4G35870 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    1
    Sequence:
    Chromosome: 4; NC_003075.7 (16990094..16992963)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene RING/U-box superfamily protein Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene GTP-binding 2 Neighboring gene Eukaryotic aspartyl protease family protein Neighboring gene winged-helix DNA-binding transcription factor family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis vacuolar sorting mutants (green fluorescent seed) can be identified efficiently by secretion of vacuole-targeted green fluorescent protein in their seeds. Fuji K, et al. Plant Cell, 2007 Feb. PMID 17293568, Free PMC Article
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_119753.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables calcium-activated cation channel activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within protein targeting to vacuole IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in intracellular anatomical structure IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    early-responsive to dehydration stress protein (ERD4)
    NP_195312.1
    • early-responsive to dehydration stress protein (ERD4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein targeting to vacuole; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT3G21620.1); Has 901 Blast hits to 753 proteins in 163 species: Archae - 0; Bacteria - 0; Metazoa - 307; Fungi - 164; Plants - 325; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      16990094..16992963
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119753.3 → NP_195312.1  early-responsive to dehydration stress protein (ERD4) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195312.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SZT4
      UniProtKB/TrEMBL
      A0A097NUT0, A0A178V1R8, A0A5S9XZ08, A0A654FW02
      Conserved Domains (2) summary
      COG5594
      Location:52 → 753
      COG5594; Uncharacterized integral membrane protein [Function unknown]
      pfam02714
      Location:410 → 713
      RSN1_7TM; Calcium-dependent channel, 7TM region, putative phosphate
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SZT4.1

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