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    Fes1B Fes1B [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824547, updated on 7-Sep-2023

    Summary

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    Gene symbol
    Fes1B
    Gene description
    Fes1B
    Primary source
    Araport:AT3G53800
    Locus tag
    AT3G53800
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Summary
    Encodes one of the Arabidopsis orthologs of the human Hsp70-binding protein 1 (HspBP-1) and yeast Fes1p: Fes1A (AT3G09350), Fes1B (AT3G53800), Fes1C (AT5G02150).
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    5
    Sequence:
    Chromosome: 3; NC_003074.8 (19930798..19932961)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene RHOMBOID-like protein 4 Neighboring gene TRF-like 4 Neighboring gene Concanavalin A-like lectin protein kinase family protein Neighboring gene C2H2 and C2HC zinc fingers superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_115240.5

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Fes1B
    NP_190948.1
    • Fes1B (Fes1B); FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleotide exchange factor Fes1 (InterPro:IPR013918), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Fes1A (TAIR:AT3G09350.1); Has 659 Blast hits to 654 proteins in 202 species: Archae - 0; Bacteria - 0; Metazoa - 193; Fungi - 199; Plants - 185; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      19930798..19932961
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001339634.1 → NP_001326231.1  Fes1B [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VEV2, A0A1I9LNM7
      Conserved Domains (2) summary
      sd00043
      Location:63 → 87
      ARM; armadillo repeat [structural motif]
      pfam08609
      Location:7 → 56
      Fes1; Nucleotide exchange factor Fes1

    2. NM_115240.5 → NP_190948.1  Fes1B [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190948.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FH14, A0A7G2EX59, Q9M346
      Conserved Domains (2) summary
      sd00043
      Location:102 → 126
      ARM; armadillo repeat [structural motif]
      pfam08609
      Location:9 → 95
      Fes1; Nucleotide exchange factor Fes1
    Nucleotide Protein
    Heading Accession and Version

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