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    AT2G31580 tRNAHis guanylyltransferase [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817716, updated on 27-Sep-2019

    Summary

    Gene symbol
    AT2G31580
    Gene description
    tRNAHis guanylyltransferase
    Primary source
    Araport:AT2G31580
    Locus tag
    AT2G31580
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T9H9.10; T9H9_10

    Genomic context

    See AT2G31580 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    14
    Sequence:
    Chromosome: 2; NC_003071.7 (13440842..13445932, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene signal transducer/transcription protein, putative (DUF1685) Neighboring gene glutathione peroxidase 2 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene hypothetical protein Neighboring gene INO80 complex subunit D-like protein

    Pathways from PubChem

    General gene information

    Homology

    • Homologs of the AT2G31580 gene: The AT2G31580 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, N.crassa, rice, and frog.
    • Orthologs
    NM_001336337.1
    NM_001336338.1
    NM_001336339.1
    NM_001336340.1
    NM_128715.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    tRNA guanylyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Process Evidence Code Pubs
    G2/M transition of mitotic cell cycle IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    cellular response to DNA damage stimulus IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    positive regulation of cell cycle IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    tRNA processing IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    cytoplasm ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    tRNAHis guanylyltransferase
    NP_565727.2
    • tRNAHis guanylyltransferase; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: tRNAHis guanylyltransferase (InterPro:IPR007537); BEST Arabidopsis thaliana protein match is: tRNAHis guanylyltransferase (TAIR:AT2G32320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      13440842..13445932 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128715.3NP_565727.2  tRNAHis guanylyltransferase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565727.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4IRQ5
      UniProtKB/TrEMBL
      A0A0F7Q2P0
      Conserved Domains (3) summary
      COG4021
      Location:49292
      Thg1; tRNA(His) 5'-end guanylyltransferase [Translation, ribosomal structure and biogenesis]
      pfam04446
      Location:323448
      Thg1; tRNAHis guanylyltransferase
      pfam14413
      Location:452552
      Thg1C; Thg1 C terminal domain
    2. NM_001336337.1NP_001325126.1  tRNAHis guanylyltransferase [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B274
    3. NM_001336338.1NP_001325127.1  tRNAHis guanylyltransferase [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VQE7, A0A1P8B2C6
    4. NM_001336339.1NP_001325128.1  tRNAHis guanylyltransferase [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B284
    5. NM_001336340.1NP_001325129.1  tRNAHis guanylyltransferase [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VQE7, A0A1P8B2C6
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