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    RUS4 root UVB sensitive protein (Protein of unknown function, DUF647) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816879, updated on 7-Sep-2023

    Summary

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    Gene symbol
    RUS4
    Gene description
    root UVB sensitive protein (Protein of unknown function, DUF647)
    Primary source
    Araport:AT2G23470
    Locus tag
    AT2G23470
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F26B6.12; F26B6_12; ROOT UV-B SENSITIVE 4
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    10
    Sequence:
    Chromosome: 2; NC_003071.7 (9998982..10001509, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Protein kinase superfamily protein Neighboring gene extra-large G-protein 1 Neighboring gene pseudo Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Knockdown of the DUF647 family member RUS4 impairs stamen development and pollen maturation in Arabidopsis. Chen YJ, et al. Plant Sci, 2020 Dec. PMID 33218621
    2. Knockdown of Arabidopsis ROOT UVB SENSITIVE4 Disrupts Anther Dehiscence by Suppressing Secondary Thickening in the Endothecium. Zhao SQ, et al. Plant Cell Physiol, 2019 Oct 1. PMID 31268148
    3. ROOT UV-B SENSITIVE2 acts with ROOT UV-B SENSITIVE1 in a root ultraviolet B-sensing pathway. Leasure CD, et al. Plant Physiol, 2009 Aug. PMID 19515790, Free PMC Article
    4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_127911.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within anther development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    root UVB sensitive protein (Protein of unknown function, DUF647)
    NP_179928.2
    • ROOT UV-B SENSITIVE 4 (RUS4); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF647 (InterPro:IPR006968); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF647 (TAIR:AT5G49820.1); Has 409 Blast hits to 406 proteins in 122 species: Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 58; Plants - 179; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      9998982..10001509 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127911.4 → NP_179928.2  root UVB sensitive protein (Protein of unknown function, DUF647) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_179928.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O80463, Q67YT8
      UniProtKB/TrEMBL
      A0A7G2E8E5
      Conserved Domains (1) summary
      pfam04884
      Location:110 → 347
      DUF647; Vitamin B6 photo-protection and homoeostasis
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q67YT8.1

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