msraa methionine sulfoxide reductase Aa [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: msraaprovided by ZNC
Official Full Name: methionine sulfoxide reductase Aaprovided by ZNC
Primary source: ZFIN:ZDB-GENE-041014-344
See related: Ensembl:ENSDARG00000029587 AllianceGenome:ZFIN:ZDB-GENE-041014-344
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: msra; si:dkey-221h15.1
Summary: Predicted to enable L-methionine-(S)-S-oxide reductase activity and peptide-methionine (S)-S-oxide reductase activity. Predicted to be involved in cellular response to oxidative stress. Predicted to be active in cytoplasm. Orthologous to human MSRA (methionine sulfoxide reductase A). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: all
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Genomic context

Location:: chromosome: 20

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	20	NC_007131.7 (38910277..39046062)
105	previous assembly	GRCz10 (GCF_000002035.5)	20	NC_007131.6 (39007398..39143183)

Chromosome 20 - NC_007131.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

Z4394 (e-PCR)
- UniSTS:26236

fj44a08.x1 (e-PCR)
- UniSTS:199362

NoName (e-PCR)
- UniSTS:238309

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables L-methionine-(S)-S-oxide reductase activity	IBA Inferred from Biological aspect of Ancestor more info
enables oxidoreductase activity	IEA Inferred from Electronic Annotation more info
enables peptide-methionine (S)-S-oxide reductase activity	IBA Inferred from Biological aspect of Ancestor more info
enables peptide-methionine (S)-S-oxide reductase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in cellular response to oxidative stress	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in cytoplasm	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: mitochondrial peptide methionine sulfoxide reductase

Names: methionine sulfoxide reductase A

NP_001076362.1

EC 1.8.4.11

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001082893.2 → NP_001076362.1 mitochondrial peptide methionine sulfoxide reductase

Status: PROVISIONAL

Source sequence(s)

BX511178, BX569784

UniProtKB/TrEMBL

A0A8M1NC54, Q5TZ05

Related

ENSDARP00000047361.5, ENSDART00000047362.8

Conserved Domains (1) summary

PRK00058
Location:19 → 230

PRK00058; methionine sulfoxide reductase A; Provisional