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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCz11 Primary Assembly
Genomic
-
NC_007125.7 Reference GRCz11 Primary Assembly
- Range
-
17601657..17659407 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_021481144.1 → XP_021336819.1 matrix-remodeling-associated protein 5
- UniProtKB/TrEMBL
- A0A8M6Z9H6, F1QCM6
- Related
- ENSDARP00000141865.1, ENSDART00000165566.2
- Conserved Domains (11) summary
-
- TIGR00864
Location:191 → 342
- PCC; polycystin cation channel protein
- smart00082
Location:218 → 235
- LRRCT; Leucine rich repeat C-terminal domain
- smart00409
Location:486 → 565
- IG; Immunoglobulin
- smart00410
Location:578 → 651
- IG_like; Immunoglobulin like
- pfam07679
Location:1277 → 1370
- I-set; Immunoglobulin I-set domain
- sd00033
Location:38 → 57
- LRR_RI; leucine-rich repeat [structural motif]
- pfam13855
Location:80 → 140
- LRR_8; Leucine rich repeat
- pfam13927
Location:2062 → 2140
- Ig_3; Immunoglobulin domain
- cd00096
Location:1886 → 1955
- Ig; Immunoglobulin domain
- cl11960
Location:1490 → 1562
- Ig; Immunoglobulin domain
- cl28434
Location:1966 → 2058
- I-set; Immunoglobulin I-set domain
-
XM_021481143.1 → XP_021336818.1 matrix-remodeling-associated protein 5
- UniProtKB/TrEMBL
- A0A8M6Z9H6, F1QCM6
- Related
- ENSDARP00000098706.2, ENSDART00000112149.3
- Conserved Domains (11) summary
-
- TIGR00864
Location:191 → 342
- PCC; polycystin cation channel protein
- smart00082
Location:218 → 235
- LRRCT; Leucine rich repeat C-terminal domain
- smart00409
Location:486 → 565
- IG; Immunoglobulin
- smart00410
Location:578 → 651
- IG_like; Immunoglobulin like
- pfam07679
Location:1277 → 1370
- I-set; Immunoglobulin I-set domain
- sd00033
Location:38 → 57
- LRR_RI; leucine-rich repeat [structural motif]
- pfam13855
Location:80 → 140
- LRR_8; Leucine rich repeat
- pfam13927
Location:2062 → 2140
- Ig_3; Immunoglobulin domain
- cd00096
Location:1886 → 1955
- Ig; Immunoglobulin domain
- cl11960
Location:1490 → 1562
- Ig; Immunoglobulin domain
- cl28434
Location:1966 → 2058
- I-set; Immunoglobulin I-set domain
Reference GRCz11 ALT_DRER_TU_1
Genomic
-
NW_018394898.1 Reference GRCz11 ALT_DRER_TU_1
- Range
-
92900..149173 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017359111.2 → XP_017214600.1 matrix-remodeling-associated protein 5
- UniProtKB/TrEMBL
- A0A8M6Z9H6, F1QCM6
- Conserved Domains (11) summary
-
- TIGR00864
Location:191 → 342
- PCC; polycystin cation channel protein
- smart00082
Location:218 → 235
- LRRCT; Leucine rich repeat C-terminal domain
- smart00409
Location:486 → 565
- IG; Immunoglobulin
- smart00410
Location:578 → 651
- IG_like; Immunoglobulin like
- pfam07679
Location:1277 → 1370
- I-set; Immunoglobulin I-set domain
- sd00033
Location:38 → 57
- LRR_RI; leucine-rich repeat [structural motif]
- pfam13855
Location:80 → 140
- LRR_8; Leucine rich repeat
- pfam13927
Location:2062 → 2140
- Ig_3; Immunoglobulin domain
- cd00096
Location:1886 → 1955
- Ig; Immunoglobulin domain
- cl11960
Location:1490 → 1562
- Ig; Immunoglobulin domain
- cl28434
Location:1966 → 2058
- I-set; Immunoglobulin I-set domain
-
XM_001332340.8 → XP_001332376.5 matrix-remodeling-associated protein 5
- UniProtKB/TrEMBL
- A0A8M6Z9H6, F1QCM6
- Conserved Domains (11) summary
-
- TIGR00864
Location:191 → 342
- PCC; polycystin cation channel protein
- smart00082
Location:218 → 235
- LRRCT; Leucine rich repeat C-terminal domain
- smart00409
Location:486 → 565
- IG; Immunoglobulin
- smart00410
Location:578 → 651
- IG_like; Immunoglobulin like
- pfam07679
Location:1277 → 1370
- I-set; Immunoglobulin I-set domain
- sd00033
Location:38 → 57
- LRR_RI; leucine-rich repeat [structural motif]
- pfam13855
Location:80 → 140
- LRR_8; Leucine rich repeat
- pfam13927
Location:2062 → 2140
- Ig_3; Immunoglobulin domain
- cd00096
Location:1886 → 1955
- Ig; Immunoglobulin domain
- cl11960
Location:1490 → 1562
- Ig; Immunoglobulin domain
- cl28434
Location:1966 → 2058
- I-set; Immunoglobulin I-set domain