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    LOC6627704 uncharacterized LOC6627704 [ Drosophila virilis ]

    Gene ID: 6627704, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC6627704
    Gene description
    uncharacterized LOC6627704
    Locus tag
    Dvir_GJ17302
    See related
    EnsemblRapid:LOC6627704
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila virilis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila
    Also known as
    GJ17302; GJ17302-PA
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    Genomic context

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    Location:
    chromosome: Un
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    103 current DvirRS2 (GCF_003285735.1) Unplaced Scaffold NW_022587572.1 (4129311..4132668)

    NW_022587572.1Genomic Context describing neighboring genes Neighboring gene probable proteasome subunit beta type-2 Neighboring gene cytosolic Fe-S cluster assembly factor NUBP1 homolog Neighboring gene structural maintenance of chromosomes protein 4 Neighboring gene U6 snRNA-associated Sm-like protein LSm7 Neighboring gene BUB3-interacting and GLEBS motif-containing protein ZNF207

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_022587572 Unplaced Scaffold Reference DvirRS2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chitin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC6627704
    Names
    Dvir\GJ17302
    Dvir\GJ17302-PA
    dvir_GLEANR_1902

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila virilis Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference DvirRS2

    Genomic

    1. NW_022587572.1 Reference DvirRS2

      Range
      4129311..4132668
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002051952.3 → XP_002051988.2  uncharacterized protein LOC6627704

      UniProtKB/TrEMBL
      B4LUF7
      Related
      XP_002051988.2, XM_002051952.3
      Conserved Domains (3) summary
      cd10974
      Location:242 → 513
      CE4_CDA_like_1; Putative catalytic domain of chitin deacetylase-like proteins with additional chitin-binding peritrophin-A domain (ChBD) and/or a low-density lipoprotein receptor class A domain (LDLa)
      cd00112
      Location:174 → 201
      LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
      pfam01607
      Location:110 → 148
      CBM_14; Chitin binding Peritrophin-A domain
    Nucleotide Protein Strain
    Heading Accession and Version

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