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    LOC6608573 periodic tryptophan protein 1 homolog [ Drosophila sechellia ]

    Gene ID: 6608573, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC6608573
    Gene description
    periodic tryptophan protein 1 homolog
    Locus tag
    Dsec_GM21242
    See related
    EnsemblRapid:LOC6608573
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila sechellia
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    GM21242; GM21242-PA
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    Genomic context

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    Location:
    chromosome: 2R
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    101 current ASM438219v1 (GCF_004382195.1) 2R NC_045950.1 (7067186..7068728)

    Chromosome 2R - NC_045950.1Genomic Context describing neighboring genes Neighboring gene proteoglycan 4 Neighboring gene 5-hydroxyisourate hydrolase Neighboring gene transcription initiation factor TFIID subunit 5 Neighboring gene peroxisome assembly factor 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_045950.1 Chromosome 2R Reference ASM438219v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in rRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    periodic tryptophan protein 1 homolog
    Names
    Dsec\GM21242
    Dsec\GM21242-PA
    dsec_GLEANR_4036

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila sechellia Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM438219v1

    Genomic

    1. NC_045950.1 Reference ASM438219v1

      Range
      7067186..7068728
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002033271.2 → XP_002033307.1  periodic tryptophan protein 1 homolog

      See identical proteins and their annotated locations for XP_002033307.1

      UniProtKB/TrEMBL
      B4HN16
      Related
      XP_002033307.1, XM_002033271.2
      Conserved Domains (3) summary
      COG2319
      Location:151 → 454
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:237 → 274
      7WD40; WD40 repeat [structural motif]
      cl02567
      Location:189 → 426
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    Nucleotide Protein Strain
    Heading Accession and Version

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