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    LOC6548204 transcription factor Ken [ Drosophila erecta ]

    Gene ID: 6548204, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC6548204
    Gene description
    transcription factor Ken
    Locus tag
    Dere_GG22895
    See related
    EnsemblRapid:LOC6548204
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila erecta
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    GG22895; GG22895-PA
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    Genomic context

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    Location:
    chromosome: Un
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    101 current DereRS2 (GCF_003286155.1) Unplaced Scaffold NW_020825207.1 (1522211..1529359, complement)

    NW_020825207.1Genomic Context describing neighboring genes Neighboring gene paired mesoderm homeobox protein 2B Neighboring gene uncharacterized LOC6548206 Neighboring gene leukocyte surface antigen CD53 Neighboring gene trifunctional enzyme subunit beta, mitochondrial Neighboring gene NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 Neighboring gene ceramide phosphoethanolamine synthase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020825207 Unplaced Scaffold Reference DereRS2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription factor Ken
    Names
    Dere\GG22895
    Dere\GG22895-PA
    dere_GLEANR_7583

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila erecta Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference DereRS2

    Genomic

    1. NW_020825207.1 Reference DereRS2

      Range
      1522211..1529359 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001976447.3 → XP_001976483.1  transcription factor Ken

      See identical proteins and their annotated locations for XP_001976483.1

      UniProtKB/TrEMBL
      B3NPU2
      Related
      XP_001976483.1, XM_001976447.3
      Conserved Domains (5) summary
      smart00225
      Location:34 → 107
      BTB; Broad-Complex, Tramtrack and Bric a brac
      sd00017
      Location:497 → 517
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:495 → 517
      zf-C2H2; Zinc finger, C2H2 type
      pfam00651
      Location:27 → 107
      BTB; BTB/POZ domain
      pfam13465
      Location:509 → 534
      zf-H2C2_2; Zinc-finger double domain
    Nucleotide Protein
    Heading Accession and Version

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