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    LOC6544898 RNA polymerase II degradation factor 1 [ Drosophila erecta ]

    Gene ID: 6544898, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC6544898
    Gene description
    RNA polymerase II degradation factor 1
    Locus tag
    Dere_GG14639
    See related
    EnsemblRapid:LOC6544898
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila erecta
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    GG14639; GG14639-PA
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    Genomic context

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    Location:
    chromosome: Un
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    101 current DereRS2 (GCF_003286155.1) Unplaced Scaffold NW_020825198.1 (763929..765612, complement)

    NW_020825198.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC6544896 Neighboring gene uncharacterized LOC6544897 Neighboring gene transfer RNA methionine (anticodon CAU) Neighboring gene protein extra-macrochaetae

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020825198 Unplaced Scaffold Reference DereRS2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of transcription regulator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RNA polymerase II degradation factor 1
    Names
    Dere\GG14639
    Dere\GG14639-PA
    dere_GLEANR_14790

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila erecta Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference DereRS2

    Genomic

    1. NW_020825198.1 Reference DereRS2

      Range
      763929..765612 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001971015.3 → XP_001971051.1  RNA polymerase II degradation factor 1

      See identical proteins and their annotated locations for XP_001971051.1

      UniProtKB/TrEMBL
      B3NJB5
      Related
      XP_001971051.1, XM_001971015.3
      Conserved Domains (2) summary
      smart00595
      Location:5 → 91
      MADF; subfamily of SANT domain
      pfam02944
      Location:243 → 276
      BESS; BESS motif
    Nucleotide Protein
    Heading Accession and Version

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