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    LOC6527252 voltage-dependent L-type calcium channel subunit beta-2 [ Drosophila yakuba ]

    Gene ID: 6527252, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC6527252
    Gene description
    voltage-dependent L-type calcium channel subunit beta-2
    Locus tag
    Dyak_GE12954
    See related
    EnsemblRapid:LOC6527252
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila yakuba
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    GE12954; GE12954-PB; GE12954-PC; GE12954-PF; GE12954-PH; GE12954-PI; GE12954-PL; GE12954-PM; GE12954-PN; GE12954-PO; GE12954-PP; GE12954-PQ; GE12954-PR
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    Genomic context

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    Location:
    chromosome: 2L
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    102 current Prin_Dyak_Tai18E2_2.1 (GCF_016746365.2) 2L NC_052527.2 (7637522..7653059, complement)
    101 previous assembly Prin_Dyak_Tai18E2_2.0 (GCF_016746365.1) 2L NC_052527.1 (7637548..7653084, complement)

    Chromosome 2L - NC_052527.2Genomic Context describing neighboring genes Neighboring gene guanylate cyclase 32E Neighboring gene uncharacterized LOC26534841 Neighboring gene D-3-phosphoglycerate dehydrogenase Neighboring gene vitelline membrane protein Vm32E Neighboring gene uncharacterized LOC6527254

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables high voltage-gated calcium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in chemical synaptic transmission IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neuromuscular junction development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of voltage-gated calcium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of voltage-gated calcium channel complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    voltage-dependent L-type calcium channel subunit beta-1; voltage-dependent L-type calcium channel subunit beta-2; voltage-dependent L-type calcium channel subunit beta-4
    Names
    Dyak\GE12954
    Dyak\GE12954-PB
    Dyak\GE12954-PC
    Dyak\GE12954-PF
    Dyak\GE12954-PH
    Dyak\GE12954-PI
    Dyak\GE12954-PL
    Dyak\GE12954-PM
    Dyak\GE12954-PN
    Dyak\GE12954-PO
    Dyak\GE12954-PP
    Dyak\GE12954-PQ
    Dyak\GE12954-PR
    dyak_GLEANR_1318

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila yakuba Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Prin_Dyak_Tai18E2_2.1 Primary Assembly

    Genomic

    1. NC_052527.2 Reference Prin_Dyak_Tai18E2_2.1 Primary Assembly

      Range
      7637522..7653059 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015197678.3 → XP_015053164.1  voltage-dependent L-type calcium channel subunit beta-4 isoform X20

      UniProtKB/TrEMBL
      A0A0R1DKW6, A0A0R1DM44
      Related
      XP_015053164.1, XM_015197678.3
      Conserved Domains (4) summary
      cd11863
      Location:69 → 130
      SH3_CACNB; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta
      pfam00625
      Location:211 → 392
      Guanylate_kin; Guanylate kinase
      pfam12052
      Location:25 → 65
      VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal
      cl17190
      Location:221 → 393
      NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...

    2. XM_015197673.3 → XP_015053159.1  voltage-dependent L-type calcium channel subunit beta-4 isoform X18

      UniProtKB/TrEMBL
      A0A0R1DJZ5, A0A0R1DK40
      Related
      XP_015053159.1, XM_015197673.3
      Conserved Domains (4) summary
      cd11863
      Location:69 → 130
      SH3_CACNB; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta
      pfam00625
      Location:207 → 388
      Guanylate_kin; Guanylate kinase
      pfam12052
      Location:25 → 65
      VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal
      cl17190
      Location:217 → 389
      NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...

    3. XM_039371498.2 → XP_039227432.1  voltage-dependent L-type calcium channel subunit beta-4 isoform X19

      UniProtKB/TrEMBL
      A0A0R1DKW6
      Related
      XP_039227432.1, XM_039371498.2
      Conserved Domains (3) summary
      cd11863
      Location:85 → 146
      SH3_CACNB; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta
      pfam00625
      Location:223 → 404
      Guanylate_kin; Guanylate kinase
      pfam12052
      Location:41 → 81
      VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal

    4. XM_015197671.2 → XP_015053157.1  voltage-dependent L-type calcium channel subunit beta-1 isoform X17

      UniProtKB/TrEMBL
      A0A0R1DJZ5, A0A0R1DSD5
      Related
      XP_015053157.1, XM_015197671.2
      Conserved Domains (4) summary
      cd11863
      Location:85 → 146
      SH3_CACNB; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta
      pfam00625
      Location:234 → 415
      Guanylate_kin; Guanylate kinase
      pfam12052
      Location:41 → 81
      VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal
      cl17190
      Location:244 → 416
      NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...

    5. XM_002088310.3 → XP_002088346.2  voltage-dependent L-type calcium channel subunit beta-1 isoform X6

      UniProtKB/TrEMBL
      B4P183
      Related
      XP_002088346.2, XM_002088310.3
      Conserved Domains (3) summary
      cd11863
      Location:69 → 130
      SH3_CACNB; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta
      pfam00625
      Location:226 → 407
      Guanylate_kin; Guanylate kinase
      pfam12052
      Location:25 → 65
      VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal

    6. XM_039371491.1 → XP_039227425.1  voltage-dependent L-type calcium channel subunit beta-1 isoform X10

      Related
      XP_039227425.1, XM_039371491.1
      Conserved Domains (3) summary
      cd11863
      Location:85 → 146
      SH3_CACNB; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta
      pfam00625
      Location:242 → 423
      Guanylate_kin; Guanylate kinase
      pfam12052
      Location:41 → 81
      VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal

    7. XM_039371489.1 → XP_039227423.1  voltage-dependent L-type calcium channel subunit beta-4 isoform X4

      Related
      XP_039227423.1, XM_039371489.1
      Conserved Domains (3) summary
      cd11863
      Location:85 → 146
      SH3_CACNB; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta
      pfam00625
      Location:229 → 410
      Guanylate_kin; Guanylate kinase
      pfam12052
      Location:41 → 81
      VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal

    8. XM_015197675.2 → XP_015053161.1  voltage-dependent L-type calcium channel subunit beta-1 isoform X2

      UniProtKB/TrEMBL
      A0A0R1DJZ2
      Related
      XP_015053161.1, XM_015197675.2
      Conserved Domains (3) summary
      cd11863
      Location:85 → 146
      SH3_CACNB; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta
      pfam00625
      Location:235 → 416
      Guanylate_kin; Guanylate kinase
      pfam12052
      Location:41 → 81
      VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal

    9. XM_015197674.2 → XP_015053160.1  voltage-dependent L-type calcium channel subunit beta-4 isoform X3

      UniProtKB/TrEMBL
      A0A0R1DRB5
      Related
      XP_015053160.1, XM_015197674.2
      Conserved Domains (3) summary
      cd11863
      Location:85 → 146
      SH3_CACNB; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta
      pfam00625
      Location:230 → 411
      Guanylate_kin; Guanylate kinase
      pfam12052
      Location:41 → 81
      VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal

    10. XM_015197672.2 → XP_015053158.1  voltage-dependent L-type calcium channel subunit beta-1 isoform X1

      UniProtKB/TrEMBL
      A0A0R1DJS2
      Related
      XP_015053158.1, XM_015197672.2
      Conserved Domains (3) summary
      cd11863
      Location:85 → 146
      SH3_CACNB; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta
      pfam00625
      Location:242 → 423
      Guanylate_kin; Guanylate kinase
      pfam12052
      Location:41 → 81
      VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal

    11. XM_039371490.1 → XP_039227424.1  voltage-dependent L-type calcium channel subunit beta-4 isoform X9

      Related
      XP_039227424.1, XM_039371490.1
      Conserved Domains (3) summary
      cd11863
      Location:85 → 146
      SH3_CACNB; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta
      pfam00625
      Location:217 → 398
      Guanylate_kin; Guanylate kinase
      pfam12052
      Location:41 → 81
      VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal

    12. XM_015197680.2 → XP_015053166.2  voltage-dependent L-type calcium channel subunit beta-4 isoform X8

      Related
      XP_015053166.2, XM_015197680.2
      Conserved Domains (3) summary
      cd11863
      Location:85 → 146
      SH3_CACNB; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta
      pfam00625
      Location:221 → 402
      Guanylate_kin; Guanylate kinase
      pfam12052
      Location:41 → 81
      VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal

    13. XM_015197676.2 → XP_015053162.1  voltage-dependent L-type calcium channel subunit beta-4 isoform X7

      UniProtKB/TrEMBL
      A0A0R1DJR9
      Related
      XP_015053162.1, XM_015197676.2
      Conserved Domains (3) summary
      cd11863
      Location:85 → 146
      SH3_CACNB; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta
      pfam00625
      Location:223 → 404
      Guanylate_kin; Guanylate kinase
      pfam12052
      Location:41 → 81
      VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal

    14. XM_015197677.2 → XP_015053163.1  voltage-dependent L-type calcium channel subunit beta-4 isoform X5

      UniProtKB/TrEMBL
      A0A0R1DJY4
      Related
      XP_015053163.1, XM_015197677.2
      Conserved Domains (3) summary
      cd11863
      Location:85 → 146
      SH3_CACNB; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta
      pfam00625
      Location:227 → 408
      Guanylate_kin; Guanylate kinase
      pfam12052
      Location:41 → 81
      VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal

    15. XM_039371497.2 → XP_039227431.1  voltage-dependent L-type calcium channel subunit beta-2 isoform X16

      Related
      XP_039227431.1, XM_039371497.2
      Conserved Domains (3) summary
      cd11863
      Location:69 → 130
      SH3_CACNB; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta
      pfam00625
      Location:207 → 388
      Guanylate_kin; Guanylate kinase
      pfam12052
      Location:25 → 65
      VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal

    16. XM_039371496.2 → XP_039227430.1  voltage-dependent L-type calcium channel subunit beta-2 isoform X15

      Related
      XP_039227430.1, XM_039371496.2
      Conserved Domains (3) summary
      cd11863
      Location:69 → 130
      SH3_CACNB; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta
      pfam00625
      Location:207 → 388
      Guanylate_kin; Guanylate kinase
      pfam12052
      Location:25 → 65
      VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal

    17. XM_039371493.1 → XP_039227427.1  voltage-dependent L-type calcium channel subunit beta-2 isoform X12

      Related
      XP_039227427.1, XM_039371493.1
      Conserved Domains (3) summary
      cd11863
      Location:85 → 146
      SH3_CACNB; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta
      pfam00625
      Location:242 → 423
      Guanylate_kin; Guanylate kinase
      pfam12052
      Location:41 → 81
      VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal

    18. XM_039371492.1 → XP_039227426.1  voltage-dependent L-type calcium channel subunit beta-2 isoform X11

      Related
      XP_039227426.1, XM_039371492.1
      Conserved Domains (3) summary
      cd11863
      Location:85 → 146
      SH3_CACNB; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta
      pfam00625
      Location:242 → 423
      Guanylate_kin; Guanylate kinase
      pfam12052
      Location:41 → 81
      VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal

    19. XM_039371495.1 → XP_039227429.1  voltage-dependent L-type calcium channel subunit beta-2 isoform X14

      Related
      XP_039227429.1, XM_039371495.1
      Conserved Domains (3) summary
      cd11863
      Location:85 → 146
      SH3_CACNB; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta
      pfam00625
      Location:230 → 411
      Guanylate_kin; Guanylate kinase
      pfam12052
      Location:41 → 81
      VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal

    20. XM_039371494.1 → XP_039227428.1  voltage-dependent L-type calcium channel subunit beta-2 isoform X13

      Related
      XP_039227428.1, XM_039371494.1
      Conserved Domains (3) summary
      cd11863
      Location:85 → 146
      SH3_CACNB; Src Homology 3 domain of Voltage-dependent L-type calcium channel subunit beta
      pfam00625
      Location:234 → 415
      Guanylate_kin; Guanylate kinase
      pfam12052
      Location:41 → 81
      VGCC_beta4Aa_N; Voltage gated calcium channel subunit beta domain 4Aa N terminal

    RNA

    1. XR_001454339.2 RNA Sequence

      Related
      XR_001454339.2
    Nucleotide Protein Strain
    Heading Accession and Version

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