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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCz11 Primary Assembly
Genomic
-
NC_007116.7 Reference GRCz11 Primary Assembly
- Range
-
9179788..9216762 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_021476399.1 → XP_021332074.1 low-density lipoprotein receptor-related protein 2
- UniProtKB/TrEMBL
-
A0A8M9PJU9
- Related
- ENSDARP00000120558.1, ENSDART00000134896.3
- Conserved Domains (7) summary
-
- smart00192
Location:427 → 458
- LDLa; Low-density lipoprotein receptor domain class A
- smart00135
Location:702 → 744
- LY; Low-density lipoprotein-receptor YWTD domain
- cd00112
Location:306 → 340
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- pfam00058
Location:680 → 718
- Ldl_recept_b; Low-density lipoprotein receptor repeat class B
- pfam07645
Location:503 → 542
- EGF_CA; Calcium-binding EGF domain
- pfam14670
Location:1130 → 1162
- FXa_inhibition; Coagulation Factor Xa inhibitory site
- cl28327
Location:569 → 666
- PHA02142; putative RNA ligase
Reference GRCz11 ALT_DRER_TU_1
Genomic
-
NW_018394564.1 Reference GRCz11 ALT_DRER_TU_1
- Range
-
275627..312601 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_021471573.1 → XP_021327248.1 low-density lipoprotein receptor-related protein 2
- UniProtKB/TrEMBL
-
A0A8M9PJU9
- Conserved Domains (7) summary
-
- smart00192
Location:427 → 458
- LDLa; Low-density lipoprotein receptor domain class A
- smart00135
Location:702 → 744
- LY; Low-density lipoprotein-receptor YWTD domain
- cd00112
Location:306 → 340
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- pfam00058
Location:680 → 718
- Ldl_recept_b; Low-density lipoprotein receptor repeat class B
- pfam07645
Location:503 → 542
- EGF_CA; Calcium-binding EGF domain
- pfam14670
Location:1130 → 1162
- FXa_inhibition; Coagulation Factor Xa inhibitory site
- cl28327
Location:569 → 666
- PHA02142; putative RNA ligase
Reference GRCz11 ALT_DRER_TU_2
Genomic
-
NW_018395234.1 Reference GRCz11 ALT_DRER_TU_2
- Range
-
281778..318752 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_021474010.1 → XP_021329685.1 low-density lipoprotein receptor-related protein 2
- UniProtKB/TrEMBL
-
A0A8M9PJU9
- Conserved Domains (7) summary
-
- smart00192
Location:427 → 458
- LDLa; Low-density lipoprotein receptor domain class A
- smart00135
Location:702 → 744
- LY; Low-density lipoprotein-receptor YWTD domain
- cd00112
Location:306 → 340
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- pfam00058
Location:680 → 718
- Ldl_recept_b; Low-density lipoprotein receptor repeat class B
- pfam07645
Location:503 → 542
- EGF_CA; Calcium-binding EGF domain
- pfam14670
Location:1130 → 1162
- FXa_inhibition; Coagulation Factor Xa inhibitory site
- cl28327
Location:569 → 666
- PHA02142; putative RNA ligase