aimp1a aminoacyl tRNA synthetase complex interacting multifunctional protein 1a [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: aimp1aprovided by ZNC
Official Full Name: aminoacyl tRNA synthetase complex interacting multifunctional protein 1aprovided by ZNC
Primary source: ZFIN:ZDB-GENE-060825-144
See related: Ensembl:ENSDARG00000060036 AllianceGenome:ZFIN:ZDB-GENE-060825-144
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: aimp1; wu:fa95a05; zgc:154081
Summary: Predicted to enable tRNA binding activity. Is expressed in somite. Human ortholog(s) of this gene implicated in hypomyelinating leukodystrophy 3. Orthologous to human AIMP1 (aminoacyl tRNA synthetase complex interacting multifunctional protein 1). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 1

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	1	NC_007112.7 (50293979..50319654)
105	previous assembly	GRCz10 (GCF_000002035.5)	1	NC_007112.6 (49650153..49675828)

Chromosome 1 - NC_007112.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables RNA binding	IEA Inferred from Electronic Annotation more info
enables tRNA binding	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: aminoacyl tRNA synthase complex-interacting multifunctional protein 1a

Names: aminoacyl tRNA synthetase complex-interacting multifunctional protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001045851.1 → NP_001039316.1 aminoacyl tRNA synthase complex-interacting multifunctional protein 1a

See identical proteins and their annotated locations for NP_001039316.1

Status: PROVISIONAL

Source sequence(s)

BC122449

UniProtKB/TrEMBL

Q0P3U2

Related

ENSDARP00000078619.4, ENSDART00000084184.5

Conserved Domains (2) summary

cd02799
Location:153 → 255

tRNA_bind_EMAP-II_like; tRNA-binding-domain-containing EMAP2-like proteins. This family contains a diverse fraction of tRNA binding proteins, including Caenorhabditis elegans methionyl-tRNA synthetase (CeMetRS), human tyrosyl- tRNA synthetase (hTyrRS), Saccharomyces cerevisiae ...

cl21478
Location:5 → 81

ATP-synt_B; ATP synthase B/B' CF(0)