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    efhc1 EF-hand domain (C-terminal) containing 1 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 493468, updated on 5-Mar-2024

    Summary

    Official Symbol
    efhc1provided by Xenbase
    Official Full Name
    EF-hand domain (C-terminal) containing 1provided by Xenbase
    Primary source
    Xenbase:XB-GENE-1011237
    See related
    Ensembl:ENSXETG00000000659
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Orthologs
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    Genomic context

    See efhc1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 5 NC_030681.2 (150468709..150480373)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) Unplaced Scaffold NW_016683369.1 (924824..943148, complement)

    Chromosome 5 - NC_030681.2Genomic Context describing neighboring genes Neighboring gene minichromosome maintenance complex component 3 Neighboring gene progestin and adipoQ receptor family member VIII Neighboring gene translocation associated membrane protein 2 Neighboring gene X-linked Kx blood group related 5

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    EF-hand domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001008105.1NP_001008106.1  EF-hand domain-containing protein 1

      See identical proteins and their annotated locations for NP_001008106.1

      Status: PROVISIONAL

      Source sequence(s)
      BC081308
      UniProtKB/TrEMBL
      A0A1B8YAX6, F7CML0, Q66IK9
      Related
      ENSXETP00000001450.5, ENSXETT00000001450.5
      Conserved Domains (1) summary
      pfam06565
      Location:86190
      DUF1126; DUF1126 PH-like domain

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030681.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      150468709..150480373
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)