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    ugp2 UDP-glucose pyrophosphorylase 2 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 493237, updated on 5-Mar-2024

    Summary

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    Official Symbol
    ugp2provided by Xenbase
    Official Full Name
    UDP-glucose pyrophosphorylase 2provided by Xenbase
    Primary source
    Xenbase:XB-GENE-974407
    See related
    Ensembl:ENSXETG00000013007
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 5 NC_030681.2 (32665976..32720980, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 5 NC_030681.1 (28689793..28744771)

    Chromosome 5 - NC_030681.2Genomic Context describing neighboring genes Neighboring gene pellino E3 ubiquitin protein ligase 1 Neighboring gene VPS54 GARP complex subunit Neighboring gene malate dehydrogenase 1 Neighboring gene WD repeat containing planar cell polarity effector

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC79677

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables UTP:glucose-1-phosphate uridylyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables nucleotidyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables uridylyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within UDP-glucose metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within glycogen biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within organic substance metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within primary metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    UTP--glucose-1-phosphate uridylyltransferase
    NP_001007511.1
    XP_012818361.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001007510.1 → NP_001007511.1  UTP--glucose-1-phosphate uridylyltransferase

      See identical proteins and their annotated locations for NP_001007511.1

      Status: PROVISIONAL

      Source sequence(s)
      BC079947
      UniProtKB/TrEMBL
      A0A6I8R1J9, Q68F95
      Related
      ENSXETP00000028512.3, ENSXETT00000028512.5
      Conserved Domains (1) summary
      pfam01704
      Location:57 → 473
      UDPGP; UTP--glucose-1-phosphate uridylyltransferase

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030681.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      32665976..32720980 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012962907.3 → XP_012818361.1  UTP--glucose-1-phosphate uridylyltransferase isoform X1

      UniProtKB/TrEMBL
      A0A6I8R1J9, A0A8J0SMG3
      Related
      ENSXETP00000075862.1, ENSXETT00000101853.2
      Conserved Domains (1) summary
      pfam01704
      Location:46 → 462
      UDPGP; UTP--glucose-1-phosphate uridylyltransferase
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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